Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1903 ATGTCGACTGCTGAAACCACATCTAACACTTCTGGATTGAAACGAAAAAGAAATAATTGTGAGGAAAAACTACCTATTACAAAACGAATATCAATGGAATGTATTTATAAACCCAGTGCACTATTAGTCGATGACGAACTTATGGCAAGAATAATGGAGCAGTCAATGCTAGTTACACTAGGCATTGAGACTTTGGTTCATAATAATGCTCATGATGCTTTACGATTGTTGACTACCAATGTGCGATTCGACTTCATAATTGTTGATTTTGATCTGCCCCTAATCAATGGACCAGAGTTTGTAAGACATGTACGTTCTATGGGCATAAGGAGCAAGATTCTTGGTTTGTGTTCAAATTATAATGCAGAAAAAAGACGCTTATTTTATTCTGCAGGAGCTGATATCGCCATAAAGAAACCTCTCTACCTAGGAACCTTAAGAGAAGTCCTTGAACATCTTTGA 462 0.368 MSTAETTSNTSGLKRKRNNCEEKLPITKRISMECIYKPSALLVDDELMARIMEQSMLVTLGIETLVHNNAHDALRLLTTNVRFDFIIVDFDLPLINGPEFVRHVRSMGIRSKILGLCSNYNAEKRRLFYSAGADIAIKKPLYLGTLREVLEHL* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1903 153 Gene3D - 31 153 - -
Aev08g1903 153 ProSiteProfiles Response regulatory domain profile. 39 153 IPR001789 GO:0000160
Aev08g1903 153 SUPERFAMILY CheY-like 38 152 IPR011006 -
Aev08g1903 153 SMART REC_2 38 150 IPR001789 GO:0000160
Aev08g1903 153 Pfam Response regulator receiver domain 41 150 IPR001789 GO:0000160
Aev08g1903 153 PANTHER HISTIDINE KINASE RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 7 142 - -
Aev08g1903 153 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1903 Aev-Chr8 17082921 17083488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1903 39 153 Response Regulator Gene Family AT3G04280 27.350 2.75e-09 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev08g1903 Response_reg 6e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1903 - K02667 cam:101509883 114.005