Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1717 ATGATGGGAAGTAGTTCAAGAGAAGGTTATCATCATGAAGCAAAACAAGAAGGGAGTGATGATATGAACAAGAGTAAAGTAATGATACCCTCATCTTCATCTATTAGTACTAGTTCATTATTATCTTCATCAAGACAATGGTCAGCGTTCAGAAACCCAAGGATTGTGAGAGTGTCACGTTCGTTTGGTGGGAAAGACAGGCACAGCAAAGTTTGCACAATCAGAGGGTTAAGAGACAGAAGGATTAGGCTCTCAGTTCCAACAGCTATTCAATTGTATGAACTTCAAGACAAACTTGGTCTTAACCAACCAAGTAAAGTCATTGATTGGCTTCTAGAAGCAACTAAACTTGACATTGATAAGTTGCCACCACTTCAATTCCCTACTCATGGATTATTCAATATCTCATCATCATCCCAACAGTTTCTTCATCCCTATAACCACCACCAAAATTCCCTTCTTTTCCCTCATCATCATGATAATAATGCTAATAATAGTGTTGTTAATTCATCACTTGGAGCATTCTATGATCCCACCAATTATTATCCCACATACCAAAATCTCATGATGGCGGCCGCAACAAAGTCCTCATCAAGGTTTTGCTGGGACACTAATAGTAACATGAGCATGGATTATTCAATGCTATCACCTCCGCCACCATCATCATCAAGGGTACTAAAAGGGAAAGAATTATTAGCTGAGAAGGGAAAGTGGATCATCAAAACAAACGGTGAGCAAGAAGAAGAAGAGAAGAACAATAATAGTCATCAAGATGATGAGGTTTCAGCAACTAGTACTACTACTCAGAGGCTTTTTCCTCCTTTACATGGTTTGTTAAACAATGCCACGTCATCATCATCATATGGTGGATTTAGTTATTACCATCATAATTCTTCATCAGAGCATTCTAATAGCTTGTCTTTGTCTCAATTTGTTGGAAGCCATGGATTATTAATGTTGGATCCACATACAATTAGTGGAAATGGTGTCTATCAATTTGCATCTTCTTCTGCTGTTGCTGCAACAACTCCTCCACCACCATCACTTTTCAGTCCTTATGCTCCATTTCTGACCACATCATCATCAATGGAAAATAATAATAATAATAATAGTGATCCAATTCCAAGGCAATTCAACCATATTCACCAGTTTATGAACTCTAGCCCTCAAGTTTTGCCTCATTACATCCCTTCTCTTCATCACCATTCATTCAATTCACCTGTTAGACCCTTCCCACCACCACTATTCAGTTCCAAGCTTCTTGATTCAAACGACTACGACAACAACAACAATCGTAGCCAATCAGATAACAAAGGGTAG 1320 0.3848 MMGSSSREGYHHEAKQEGSDDMNKSKVMIPSSSSISTSSLLSSSRQWSAFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYELQDKLGLNQPSKVIDWLLEATKLDIDKLPPLQFPTHGLFNISSSSQQFLHPYNHHQNSLLFPHHHDNNANNSVVNSSLGAFYDPTNYYPTYQNLMMAAATKSSSRFCWDTNSNMSMDYSMLSPPPPSSSRVLKGKELLAEKGKWIIKTNGEQEEEEKNNNSHQDDEVSATSTTTQRLFPPLHGLLNNATSSSSYGGFSYYHHNSSSEHSNSLSLSQFVGSHGLLMLDPHTISGNGVYQFASSSAVAATTPPPPSLFSPYAPFLTTSSSMENNNNNNSDPIPRQFNHIHQFMNSSPQVLPHYIPSLHHHSFNSPVRPFPPPLFSSKLLDSNDYDNNNNRSQSDNKG* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1717 439 MobiDBLite consensus disorder prediction 241 257 - -
Aev08g1717 439 MobiDBLite consensus disorder prediction 415 439 - -
Aev08g1717 439 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 436 IPR005333 GO:0003700
Aev08g1717 439 MobiDBLite consensus disorder prediction 258 276 - -
Aev08g1717 439 Pfam TCP family transcription factor 64 163 IPR017887 -
Aev08g1717 439 ProSiteProfiles TCP domain profile. 64 122 IPR017887 -
Aev08g1717 439 MobiDBLite consensus disorder prediction 421 439 - -
Aev08g1717 439 PANTHER TRANSCRIPTION FACTOR TCP17 1 436 - -
Aev08g1717 439 MobiDBLite consensus disorder prediction 8 22 - -
Aev08g1717 439 MobiDBLite consensus disorder prediction 241 276 - -
Aev08g1717 439 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1717 Aev-Chr8 13874050 13875369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1717 48 132 TCP Transcription Factor Family AT5G60970 88.235 2.10e-47 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aev08g1717 TCP 2.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1717 - - gmx:100804574 273.478