Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1682 ATGAAGTCATCAAACATAGGATCTGTTATCCCTTGTGGTGGCTTAGCATTCTTACTTATATTACTGTTTTCTTGCTCCTCATTCACTTCTACAGATGCCTATGATGCACTTGATCCAACTGGCAATATAACAATCAAATGGGATGTCATAAGTTGGACTCCAGATGGCTATGTTGCCGTTGTTTCGATGTTCAACTTCCAACAGTATCGCCATATCCAGGCCCCGGGATGGTCATTAGGTTGGACATGGGCGAAAAAGGAAGTGATTTGGAACATGATGGGAGCCCAAACCACAGAGCAAGGTGACTGCTCAAAGTTCAAAGCAGGAATACCGCATTGCTGCAAGAAGGATCCAACAGTTGTGGATTTGCTTCCAGGAACACCTTACAACCAGCAAATCGCGAATTGTTGCAAAGGCGGTGTACTTAGTTCATGGGCTCAGGATTCCAGCACTGCTGTAAGCTCATTTCAGGTTAGTGTCGGTTCGGCCGGAACGACTAACAGAACTGTCAAACTGCCAAGAAATTTTACCCTCAAAGCACCAGGACCTGGTTATACTTGCGGCCCTGCAAAGATCGTTAGGCCAACTAAATTTATTACTAGTGACAAGAGGAGAATCACCCAAGCTTTGATGACCTGGAATATTACCTGTACATACTCTCAATTCTTGGCTCAAAAAACACCAAGTTGTTGTGTTTCCCTCTCATCCTTCTACAATGATACGGTAGTAAACTGCCCAACATGCACCTGTGGTTGCCAAAACAAAACACAACCAGGAAGCTGTGTAGAAAGAGACTCGCCACATTTATCATCAGTGCTATCATCATCAGGAAAGTCTGCTGATGCACCTCTTGTCCAGTGTACCAGCCATATGTGTCCTATTCGAGTGCACTGGCACGTGAAGCTCAATTACAAAGAGTACTGGAGGATCAAGATCACGATCACAAATTTCAACTACAGAATGAACTACACGCAATGGAACCTTGTCGTGCAGCACCCGAATTTCGATAATCTGACAGAGAATTTCAGCTTCAATTACAAGCCACTAACGCCTTACGAGGGATTAAATGATACCGCTATGCTATGGGGGGTGAAGTTCTATAATGATTTTCTTTCTTCAGCTGGACCCCTCGGAAATGTACAGTCAGAACTCTTGTTTAGAAAGGACAAAGCAACCTTCACTTTTGATAAAGGTTGGGCTTTCCCAAGAAGGATTTACTTCAATGGGGATAACTGTGTTATGCCGCCTCCCGACGCATACCCATGGCTGCCGAATGCGAGTTCAAGAGCATTTTTCTCTTTACTAAGCACTGTCATAGCCACTTTAGCTTCCTTAATCTTATTGAATTAG 1350 0.4393 MKSSNIGSVIPCGGLAFLLILLFSCSSFTSTDAYDALDPTGNITIKWDVISWTPDGYVAVVSMFNFQQYRHIQAPGWSLGWTWAKKEVIWNMMGAQTTEQGDCSKFKAGIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDSSTAVSSFQVSVGSAGTTNRTVKLPRNFTLKAPGPGYTCGPAKIVRPTKFITSDKRRITQALMTWNITCTYSQFLAQKTPSCCVSLSSFYNDTVVNCPTCTCGCQNKTQPGSCVERDSPHLSSVLSSSGKSADAPLVQCTSHMCPIRVHWHVKLNYKEYWRIKITITNFNYRMNYTQWNLVVQHPNFDNLTENFSFNYKPLTPYEGLNDTAMLWGVKFYNDFLSSAGPLGNVQSELLFRKDKATFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRAFFSLLSTVIATLASLILLN* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1682 449 Pfam COBRA-like protein 57 220 IPR006918 GO:0010215|GO:0031225
Aev08g1682 449 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Aev08g1682 449 PIRSF COBRA 8 449 IPR006918 GO:0010215|GO:0031225
Aev08g1682 449 PANTHER PROTEIN COBRA 11 448 IPR006918 GO:0010215|GO:0031225
Aev08g1682 449 PANTHER COBRA-LIKE PROTEIN 11 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1682 Aev-Chr8 13324976 13328554 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1682 19 447 COBRA Gene Family AT3G02210 72.558 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1682 - - gmx:100815779 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1682 08 13324976 13328554 Aev08g1682 08 13324976 13328554 ECH
Aev01g2199 01 26325840 26328497 Aev08g1682 08 13324976 13328554 PCT