Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1676 ATGGAGTCTTCATGGAGTTATGTTTCTGAAGATAAAGGGTATGTCTCAAATGATGCGATTTCGCCTCCCGACACGCTTGAGAGGAGTAACAAAGGTTCCTTTTTGGGTTGGGAACTGAAAACTCCATGTGCTTTTAACAATGACATATTGGGTTTGGGTCAGCAAAACATTGAGAATCAAGGTTTTGAGGAATTGGGGTTTCATCATGGGATTTTGGGGAAACCATCGTTGTCTGATGATCCAATTGGTGATGTTCAGAGCAGAAAGATGGATAGTGATCCTGGCTGCAGGGTTGGTACTAGTCCTGTTGTGGCAGCCCCAAATGCATTTTCCTCAAGAGGGAACTTCGATTCCAAGGTTTCTAACTCTCTGGGGGACTCTGCTGGTCGCGATTCGTTCATTGACTTGAAGCTCGGTAGATTTGCCGATCATGGAGATGCTGGCAGGGGTCCAACCTGTTCCAAAGGAGCCCCCATTGAGTCGTCGGCACCTCCCAAGAGGGTGCGAGCTTCGGGGCCGCACTCTCAGACTGCATACTGCCAAGTCTTTAGCTGTAACAAGGATCTGAGTGGTTGCAAAGACTACCACAAGAGGCACAAAGTTTGTGAGGTTCACTCCAAGACTTCCAAAGTTATAGTGAATGGCATTGAACAAAGGTTTTGTCAGCAATGTAGTAGGTTTCATTTGCTGGCTGAATTTGATGATGGTAAGCGTAGCTGTCGTAAACGCCTTGCAGGCCATAATGAACGGCGAAGGAAACCACAAGTTGGTATTCACTCTGGAAAGCCCGGGAGGTTGCTTCAGCCATACGGTTACGGTGATAGTAGATTCCATGGAACCATGCTTACATCTGCATCTTTTATCTGCCAAGAGATACTCCCGAGCGGGGTCTTATCTTCCGAGCGATATGGGACAAATGATTGGTGGAGACCTGTAAAAGCTGAAGATGGCACCGGTTTTAGGCATCTTTCTTCTATTCCAATTAACAATGGACGCAATCAATCGCGATCACCGTTTCCTTCATACAACGAAAAACAGTTTCCCTTTCTTCATGAAAATGGCGCTACATCTGCTACTGCAAGCATCTTCTGTGAAAACAATAGTCAATATCCCATCCTTGGTAGTGAGGATTTCAACGTTTTTGATACAGAATCAGCTGTTCAAGGATTATCGGGGATTTCGGACACTGGTTGTGCTCTCTCTCTTCTGTCACCCCAATCGCAAAACTCTTCAAGCCAGTCATCAGGAATTCCCATGGCTCACCCCTTAGTCATTCCCAGCAGCCATAGCCATTACAGCATGAGTCAGGTCTCCAAAAAGATGATAGGAATAAGCTCGCAGTCGCAGGCGTCGAGTGGAGTCTCGGATAGGTTTCAATCTGAATTGAATCCTGCAGCAGATGGAAGCCATCTAAGTCCTGTGTTGATATCCGACAATAATGAAATTGTGAACTTTGATATGGCAGATGGGATTTTCCAAGGGTCGGAATTTGTGAACGTGAAAGATCGTCTCTCCTGTGAACATGTCCCAACCATAGACTTGCTTCAACTGTCGTCACAGCTTCAGCGAGTCGAGCATCAGAGGCAATCCTTGCAGGTGAAGCAAGAAAATGATTCTCCCTGCTCTCTCCGGATTACTTGA 1641 0.4625 MESSWSYVSEDKGYVSNDAISPPDTLERSNKGSFLGWELKTPCAFNNDILGLGQQNIENQGFEELGFHHGILGKPSLSDDPIGDVQSRKMDSDPGCRVGTSPVVAAPNAFSSRGNFDSKVSNSLGDSAGRDSFIDLKLGRFADHGDAGRGPTCSKGAPIESSAPPKRVRASGPHSQTAYCQVFSCNKDLSGCKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQVGIHSGKPGRLLQPYGYGDSRFHGTMLTSASFICQEILPSGVLSSERYGTNDWWRPVKAEDGTGFRHLSSIPINNGRNQSRSPFPSYNEKQFPFLHENGATSATASIFCENNSQYPILGSEDFNVFDTESAVQGLSGISDTGCALSLLSPQSQNSSSQSSGIPMAHPLVIPSSHSHYSMSQVSKKMIGISSQSQASSGVSDRFQSELNPAADGSHLSPVLISDNNEIVNFDMADGIFQGSEFVNVKDRLSCEHVPTIDLLQLSSQLQRVEHQRQSLQVKQENDSPCSLRIT* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1676 546 MobiDBLite consensus disorder prediction 147 172 - -
Aev08g1676 546 Coils Coil 514 534 - -
Aev08g1676 546 PANTHER 1 PROTEIN, PUTATIVE-RELATED 45 546 - -
Aev08g1676 546 Pfam SBP domain 180 253 IPR004333 GO:0003677
Aev08g1676 546 Gene3D - 170 241 IPR036893 GO:0003677|GO:0005634
Aev08g1676 546 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 45 546 IPR044817 GO:0003677
Aev08g1676 546 SUPERFAMILY SBT domain 178 258 IPR036893 GO:0003677|GO:0005634
Aev08g1676 546 MobiDBLite consensus disorder prediction 245 264 - -
Aev08g1676 546 ProSiteProfiles Zinc finger SBP-type profile. 177 254 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1676 Aev-Chr8 13220075 13223682 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1676 134 298 SBP-box Gene Family AT1G69170 53.939 1.23e-47 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aev08g1676 SBP 7.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1676 - - gmx:100777766 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2201 01 26336914 26339891 Aev08g1676 08 13220075 13223682 ECH
Aev08g1676 08 13220075 13223682 Aev08g1676 08 13220075 13223682 ECH