Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1652 ATGAAGGTACGGGCGGTGAAGATGAGGGAAGCCCACGCCCACAAGGGCGGCGCTTCCTTCTGCTCGATCCTGTGGGACCAGCAGGCCCGCCACCTCATCACTGCAGCCGCCTCCGATGTCTCCGTCTCCATCCACGACCCTCTCTTTCCCTCCGCCGCCCCCAGGATTCTCCGCCACCACCGCGACGGGGTAACCGCCCTCGCCCTTAGCCCCAACTCCACTTGTCTAGCTTCCGGATCTGTCGATCACTCCGTCAAACTCTACAAATTCCCTGGTGGAGAGTTTGAGACCAATATTACCAGGTTTACACTTCCAATACGTTCCTTAGCATTCAACAAATCAGGGAGCATGTTAGCAGCTGCTGGTGATGATGAAGGGATCAAACTCATAAACACAATTGATGGCTCCATTGCTAGGGTCCTCAAAGGGCACAAAGGTTCTGTCACCTGCTTAACTTTTGACCCGAATGGTGAATACTTAGCATCCCTGGATTCAACTGGAACCGTTATTTTTTGGGAACTTCATTCAGGGAGAATCCTTCATAACCTAAAAGGCGTTTCCCCTGATAATGGAGTGGATTATTCAACCATGAATGTTCTCTGCTGGAGTCCTGATGGCGAGACCTTAGCCGTTCCGGGGTTGCACAATGATGTGGTGATCTATGATAGGGACACTGCTGAGAAGTTATTTTCTCTGAGAGGGGATCACATACAACCGGTCTGCTTCTTGTGTTGGTCACCCAATGGTAAGTACATGGCTACTTCTGGTTTAGATAAGCAGGTTCTGATATGGGATGTTGATAGGAAGCAAGACATTGATAGACAAAAATTTGATGAAAGAGTATGTAGCATGGCTTGGAAGCCAATTGGGAATGCCTTAGCTGTTATTGATGTGATGGGAAAGTATGGTATATGGGATTCTGTTATACCTTCATCTATGAAGTCTCCAACCGAGGATATACCTGTGCAGAGCAAGAGCAATGGGCTTCTTTTCTTTGAAGAGGATGATCTAGAACCTAGCGCGAGTGGAAGCTTGAGTGATCTTGGTCAGAATAGTAATGATGAGTCTGAGCCACCTAGTAGGAAGAGACTGCGTAAACAGTCCTTCAATGGGGAATCCTTTGATGAGGATGGCCGTGATGAAATCAATTTGTTTCCGAATGTTGAATCTCATAAAAGGAGAAGTCGCTCACACAAGGAAAATTTGGATGTTGTGAATGTGGGAAGTAGAAGCACTGTTGTTGCATCTAGGCCGAAGATGCAGGGGGCGTTTCAGCCAGGGTCCACTCGGGTGCAGCCTGGAAAAAGGCGATTCTTATGCTACAATATGCTTGGACTTATAACCACTGTCGAACATGATGGATATTCCCATATTGAGATTGATTTTCATGATACTGGAAGCAGTCCACGAATTCCGTCAATGACTGATCATTTTGGATTTACAATGGCTGCTTTGAATGAGAGTGGGAGCGTCTTTGCAAATCCTTGCAAGGGGGAGAATAACATGAGCACTCTCATGTATCGCCCATTTACTACCTGGGCAAATAATAGTGAGTGGTCTATGCGTTTTGAAGGAGAAGAAGTGAAGGCAGTTGCACTTGGTGCTGCTTGGGTGGCTGCAATAACTAGTTTTAACTATCTTCGTATCTTTACTGAGGGTGGTTTGCAGAGACATGTTATTTCATTAGATGGGCCAGTGGTAACTGCATCGGGTTTCAAGGATAAGCTTGCAATTGTCACTCATGCAAGTGATTGTCTTTCTTCCAATGATCAGGTGCTGGAATTTAGAGTATTTAATGTACCTCATGGAACCCAACCCCTTCGAGGTCGCTTGCCATTAACTCCAGGTTCATCTCTAAGTTGGTTTGGGTTTAGCGAAGAAGGCCAATTGAGTTCATATGATTCCAAGGGTGTGTTAAGAGTATATACAAGCCAATTTGGTGGTAGCTGGCTCCCTCTCTTCAGTGCTGTCAAAGAGAAGAAATCAGATGAAAACTATTGGGTTGTGGGGTTGAATACAACCAAGTTATTTTGTGTAGCATGCAAAAAGCCTGACACCTTCCCGCAGGTGTTGCCAAAGCCAGTCCTCACTCTACTAAATCTTTCATTTCCTCTTGCTTCCTCTGATTTGGGATCTGAAGCCCTTGAAAATGAGTTTATAATGAACAACATGCATCTCTCTGAGATTCAGAAAAAAATGGAAGAAATGGCTAGTGCTGGTTTTGACACTAGTTCACTTGATGATGAAGCTTTTAATTTTGAAGCAGCACAAGATAGGTGTATACTTAGGTTAATAGCATCCTGCTGTAATGGTGACAAGCTCGTACGTGCAACTGAACTTGTGAAGCTTTTGACATTGGAAAAATCAATGAAAGGTGCAATAAAACTGGTTACTGCTCTCAAGCTTCCAAACTTAGCTGAAAGGTTCAGCAGCATATTGGAGGAAAGGCTACTCAATGAAATGAAGAAAACTACAGAAACAAACCCCAAAGAAAAGTGTACTGCACCCGTTACAGTTGATGCTCCAACTAGCGGAAGCAAGGCCCCAACTCAGACTGAAGCATTAAAAACAGTGACAGTGTCATCATTGCCAAAATTATCTGCTCCTTTGTTCATAAGAAAAGACAAGTCACAAGGAGTGAACAAGAGTGCAATGGTGGATGAAACCATGGAGGCAAAGCAGAAAGGGTATGAAACAAGTGACAAAGAGGGAAAGGTGCAACCTCCGCTTCCTCGTACAAATGATCCTATAACGTTGTCAAATAAGATGTCAGTTAATAAGTCTGGTACCAGTTTGGGACAATCTAGTAGGCCCTCTAATCCATTTTTGAAGTCCTCTGTCAAGTGA 2847 0.4464 MKVRAVKMREAHAHKGGASFCSILWDQQARHLITAAASDVSVSIHDPLFPSAAPRILRHHRDGVTALALSPNSTCLASGSVDHSVKLYKFPGGEFETNITRFTLPIRSLAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGSVTCLTFDPNGEYLASLDSTGTVIFWELHSGRILHNLKGVSPDNGVDYSTMNVLCWSPDGETLAVPGLHNDVVIYDRDTAEKLFSLRGDHIQPVCFLCWSPNGKYMATSGLDKQVLIWDVDRKQDIDRQKFDERVCSMAWKPIGNALAVIDVMGKYGIWDSVIPSSMKSPTEDIPVQSKSNGLLFFEEDDLEPSASGSLSDLGQNSNDESEPPSRKRLRKQSFNGESFDEDGRDEINLFPNVESHKRRSRSHKENLDVVNVGSRSTVVASRPKMQGAFQPGSTRVQPGKRRFLCYNMLGLITTVEHDGYSHIEIDFHDTGSSPRIPSMTDHFGFTMAALNESGSVFANPCKGENNMSTLMYRPFTTWANNSEWSMRFEGEEVKAVALGAAWVAAITSFNYLRIFTEGGLQRHVISLDGPVVTASGFKDKLAIVTHASDCLSSNDQVLEFRVFNVPHGTQPLRGRLPLTPGSSLSWFGFSEEGQLSSYDSKGVLRVYTSQFGGSWLPLFSAVKEKKSDENYWVVGLNTTKLFCVACKKPDTFPQVLPKPVLTLLNLSFPLASSDLGSEALENEFIMNNMHLSEIQKKMEEMASAGFDTSSLDDEAFNFEAAQDRCILRLIASCCNGDKLVRATELVKLLTLEKSMKGAIKLVTALKLPNLAERFSSILEERLLNEMKKTTETNPKEKCTAPVTVDAPTSGSKAPTQTEALKTVTVSSLPKLSAPLFIRKDKSQGVNKSAMVDETMEAKQKGYETSDKEGKVQPPLPRTNDPITLSNKMSVNKSGTSLGQSSRPSNPFLKSSVK* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1652 948 SUPERFAMILY WD40 repeat-like 21 306 IPR036322 GO:0005515
Aev08g1652 948 ProSiteProfiles Trp-Asp (WD) repeats profile. 233 274 IPR001680 GO:0005515
Aev08g1652 948 Gene3D - 195 307 IPR015943 GO:0005515
Aev08g1652 948 MobiDBLite consensus disorder prediction 824 850 - -
Aev08g1652 948 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 141 178 - -
Aev08g1652 948 Pfam WD domain, G-beta repeat 229 265 IPR001680 GO:0005515
Aev08g1652 948 Pfam WD domain, G-beta repeat 55 88 IPR001680 GO:0005515
Aev08g1652 948 Pfam WD domain, G-beta repeat 139 172 IPR001680 GO:0005515
Aev08g1652 948 MobiDBLite consensus disorder prediction 892 948 - -
Aev08g1652 948 SMART WD40_4 225 265 IPR001680 GO:0005515
Aev08g1652 948 SMART WD40_4 134 173 IPR001680 GO:0005515
Aev08g1652 948 SMART WD40_4 176 222 IPR001680 GO:0005515
Aev08g1652 948 SMART WD40_4 50 89 IPR001680 GO:0005515
Aev08g1652 948 SMART WD40_4 4 46 IPR001680 GO:0005515
Aev08g1652 948 SMART WD40_4 92 131 IPR001680 GO:0005515
Aev08g1652 948 SMART WD40_4 268 306 IPR001680 GO:0005515
Aev08g1652 948 ProSitePatterns Trp-Asp (WD) repeats signature. 252 266 IPR019775 -
Aev08g1652 948 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 233 267 - -
Aev08g1652 948 MobiDBLite consensus disorder prediction 913 948 - -
Aev08g1652 948 CDD WD40 14 295 - -
Aev08g1652 948 Gene3D - 1 194 IPR015943 GO:0005515
Aev08g1652 948 MobiDBLite consensus disorder prediction 338 382 - -
Aev08g1652 948 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 57 89 - -
Aev08g1652 948 Pfam Minichromosome loss protein, Mcl1, middle region 423 705 IPR022100 -
Aev08g1652 948 MobiDBLite consensus disorder prediction 356 382 - -
Aev08g1652 948 ProSiteProfiles Trp-Asp (WD) repeats profile. 57 98 IPR001680 GO:0005515
Aev08g1652 948 ProSiteProfiles Trp-Asp (WD) repeats profile. 141 182 IPR001680 GO:0005515
Aev08g1652 948 PANTHER WD REPEAT AND HMG-BOX DNA BINDING PROTEIN 1 911 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1652 58 295 U-box Gene Family AT2G33340 24.066 2.70e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1652 K11274 - gmx:100818807 1497.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1652 08 12828641 12834308 Aev08g1652 08 12828641 12834308 ECH