Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1595 ATGAATTCTTCTGTCACTGTATTACCAGCTAAACGCCAAGCTCCAACCGGATTTTCTCCTGAAGGATGCAAGAAGCTGAAATCATCATCTGATTGCCCACCATACTCAGCATGCAACAGAACTGAACCAAATACCCCAGAGAATTCCTCAGCTGTTGTCGATTACAGTAATCCATTTGCAATTTCTGATGTTCTGGATCGTTTAGACAGTGGAAGATTTGGAAGTGTCACGAAGGACATAGAAGCCCTTGTAGCCCAAAAAATGCAAATGTTGGGCCCATACTTTGCACAATATCCTGCACTGGTTAATCAATTGTTGAACGTGGTAGCAAACAAGGATGAAAAAGCTCCTAAGTCGGAAATTGAAGAAGTTACTGGTTTAACACATGACAATGTGATAGACGTGGAGGGAGAGCACATAAAAAAGGATGCTCCTGCAGCACCTTTATCTGTTGTGATCATTGACTCAGATGACGAAGATGATAGAGATAAAAAATCTGATGGTCCATTTCATGAAATTGTGTTGCCGATGCAAGTTAGACCATCTCCTGCCTTGAAGATGATTGAGTACCATGCTTCCATCCCATACCATGGAAAAGGTGATGAAGCAAAAATTGAAAATGGGAAAAGTCTGAATGGTAAAGGCAAGAGTCCCAGAGACAAAGGTGTTTATGTTGGTGTACAGGAGGAAGAAGATGATGTTGGTACCAAAGATGATGGCCTGAGCGATATTTGGAGGGAGATGTCAATGGCTATTGAATGTTCAAAAGATGTTTCTGTGAATCCTGTTCATGAAGAAGAAGAGGAAAAAGAGGAAGACTGTGATCATTCTTTTGTTTTAAAAGATGATCTTGGTTATGTTTGTCGTGTGTGCGGGGTTATTGACAAAAAAATTGAAAACATATTTGAGTTTCAATACAAGGTTAAGAAGAGTACAAGAACTTACATGCATGATTCAAGGAATGCCAAAGGTAAAACAGATGCATCTGGAATTAAGTTTGCTGAAGATGATCTCTTGGTGACTGAAATCCCTGCACACCCAAGGCATATGAAGCAAATGAAACCTCACCAAGTGGAGGGGTTTAATTTTCTTATAAGAAACCTCGCGGGTGACAATCCTGGGGGCTGCATCTTGGCCCATGCTCCGGGATCTGGGAAGACTTTCATGATAATAAGTTTCATGCAGAGTTTTCTTGGAAAATATCCTGATGCTAGACCCCTGGTGGTGCTTCCAAAGGGAATACTGTCAACATGGAAAAAGGAGTTCCAGATATGGCAAGTGGAGGACATACCACTTCTGGATTTTTACAGTGTTAAGGCTGACAATAGATTCCAACAACTGGAAGTGTTGAAAAGGTGGGTGCAGCAGAAGAGCATCCTTTTCTTGGGATACAAACAGTTCTCCTCAATTGTTTGTGAGAATGGAACCAACCGGGCATCAGTTGATTGCCAGGAGATACTCCTTAAGGCTCCATCGATTCTCATTTTGGATGAGGGGCACAACCCAAGGAATGAAAACACCGATATGGTGCAGTCCCTTGCAAAAGTAAAGACGCCTCGCAAAGTTGTGCTGTCAGGAACCCTTTATCAAAATCATGTCAAGGAGGTTTTCAACATCCTAAATCTTGTCCGGCCGAAGTTTCTGAAGATGGAAACATCTAGGCCTATTGTCAAGCGCATTCACAGTAGAGTGCATATACCTGGTGTTAGAAGCTTTTTCGACTTGGTTGAAAACACTTTGCAGAAGGATCCCGATTTTAAAAGGAAAGTGGCTGTCATACAAGATTTGCGTGAAATGACAAGCAAGGTACTTCATTATTACAAGGGTGATTTTCTCGATGAGCTTCCTGGTCTAGTTGACTTTACGGTGGTACTCAAACTTACACCTAGACAGAAGCAAGAAGCTGAGAGATTGAAGAGGCAGCAGTCCAGAAAGTTTAAAATATGTTCTGTTGGAAGTGCCATCTATCTTCACCCTAAATTAAAACCTGTCGCTGAAAAATGTGGTGAAAACTCCATATCTGATAGTATAATGGATGATATGATTGATAAACTAGATATCAGAGATGGTGTCAAGTCAAAATTCTTCCGCAACATTTTGAACCTATGCGAATCCGCTGGGGAGAGGCTTCTGGTTTTTAGCCAATATCTCTTACCGTTGAAGTACTTGGAAAGGTTAGTTGTGAGATGGAAGGGGTGGAGTCTAGGCAAAGAAATCTTTGTCATCTCAGGTGAATCAAGCTCTGAACAACGGGAGTGGTCCATGGAAAGATTTAACACCTCCCCTGATGCTAAAATCTTCTTTGGCTCGATCAAGGCGTGTGGAGAGGGCATATCACTGGTTGGCGCATCCCGCATTATTATTTTAGATGTTCATCTGAATCCATCAGTCACTCGCCAAGCCATTGGTCGAGCATTCCGGCCAGGCCAGACAAAGAAAGTCTATGTATATCGATTGGTAGCAGCTGATTCTCCTGAAGAGGAAGACCACAGTACTTGCTACAAGAAGGAGCTAATTTCCAAAATGTGGTTTGAATGGAACGAGTACTGCGGTGATCGAGCTTTTGAAGTAGAGACAGTTCCTGTGAAAGAATGTGGTGATGAATTCCTTGAAACTCCATGGTTGGCTGAAGATGTAAAAGCTCTGTATAGAAGGTAG 2658 0.4206 MNSSVTVLPAKRQAPTGFSPEGCKKLKSSSDCPPYSACNRTEPNTPENSSAVVDYSNPFAISDVLDRLDSGRFGSVTKDIEALVAQKMQMLGPYFAQYPALVNQLLNVVANKDEKAPKSEIEEVTGLTHDNVIDVEGEHIKKDAPAAPLSVVIIDSDDEDDRDKKSDGPFHEIVLPMQVRPSPALKMIEYHASIPYHGKGDEAKIENGKSLNGKGKSPRDKGVYVGVQEEEDDVGTKDDGLSDIWREMSMAIECSKDVSVNPVHEEEEEKEEDCDHSFVLKDDLGYVCRVCGVIDKKIENIFEFQYKVKKSTRTYMHDSRNAKGKTDASGIKFAEDDLLVTEIPAHPRHMKQMKPHQVEGFNFLIRNLAGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPDARPLVVLPKGILSTWKKEFQIWQVEDIPLLDFYSVKADNRFQQLEVLKRWVQQKSILFLGYKQFSSIVCENGTNRASVDCQEILLKAPSILILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKMETSRPIVKRIHSRVHIPGVRSFFDLVENTLQKDPDFKRKVAVIQDLREMTSKVLHYYKGDFLDELPGLVDFTVVLKLTPRQKQEAERLKRQQSRKFKICSVGSAIYLHPKLKPVAEKCGENSISDSIMDDMIDKLDIRDGVKSKFFRNILNLCESAGERLLVFSQYLLPLKYLERLVVRWKGWSLGKEIFVISGESSSEQREWSMERFNTSPDAKIFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQTKKVYVYRLVAADSPEEEDHSTCYKKELISKMWFEWNEYCGDRAFEVETVPVKECGDEFLETPWLAEDVKALYRR* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1595 885 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 367 546 IPR014001 -
Aev08g1595 885 CDD SF2_C_SNF 683 820 - -
Aev08g1595 885 Pfam Helicase conserved C-terminal domain 698 808 IPR001650 -
Aev08g1595 885 Gene3D - 321 565 IPR038718 -
Aev08g1595 885 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 336 548 IPR027417 -
Aev08g1595 885 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 491 847 IPR027417 -
Aev08g1595 885 MobiDBLite consensus disorder prediction 32 51 - -
Aev08g1595 885 PANTHER PROTEIN CHROMATIN REMODELING 35 17 885 - -
Aev08g1595 885 Pfam SNF2-related domain 373 629 IPR000330 GO:0005524|GO:0140658
Aev08g1595 885 MobiDBLite consensus disorder prediction 201 221 - -
Aev08g1595 885 SMART helicmild6 721 809 IPR001650 -
Aev08g1595 885 MobiDBLite consensus disorder prediction 201 216 - -
Aev08g1595 885 MobiDBLite consensus disorder prediction 1 51 - -
Aev08g1595 885 Gene3D - 616 859 IPR027417 -
Aev08g1595 885 SMART ultradead3 349 563 IPR014001 -
Aev08g1595 885 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 695 868 IPR001650 -
Aev08g1595 885 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 17 885 IPR044567 GO:0080188
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1595 Aev-Chr8 11728950 11735540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1595 706 848 RAD5 or RAD16-like Gene Family AT1G61140 32.867 5.61e-14 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aev08g1595 SNF2_N 3.5e-19 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1595 K10875 - gmx:100780454 1377.46