Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1590 ATGAGGAAACCTGATCTGATGGGAAAAGAGAACAACAACAACAAAATGAGCAACAACAACAACAACATTGTTAATAAGAGCAAGTTAAGGAAAGGGTTGTGGTCACCGGAGGAAGATGAGAAGCTGATGAGGTATATGCTGAGCAATGGACAAGGTTGTTGGAGTGACATTGCTAGGAATGCTGGACTCCAACGGTGTGGAAAGAGTTGTCGCCTTCGTTGGATCAATTACTTGAGGCCTGACCTCAAGCGTGGTGCATTCTCTCCACAAGAGGAAGATCTCATCATTCACTTGCATTCCATTCTTGGCAACAGGTGGTCTCAAATTGCAGCACGTCTTCCTGGACGCACAGACAATGAGATAAAGAATTTCTGGAACTCCACACTCAAGAAAAGGTTCAAAATTGGCACAAATTCTTCTCCATCACCAAACAACAGTACTGACGACTCATCATCGGATCATCATCAACCTACAGATCATGTTATGGTGGGTGGGATGATCATGCCCATTAACGACCATCATCATCATGACCTCATGGCCTCCATGTGCATGGACTCATCTTCATCAACATCATCATCAATCTCGTCCATCCAAGCAGCATCTATGGTTTTTGCTGACCAATATGACCCATTATTATTTCCTCAACTTCATGATATGAGTTTTTCAGCAGGTTTCCCTGATGCTTGCTTTACCCAAATTGGCATGGTAGATGGGAATCATAATCATAATGATAATGAAAATTATTATGGGATTTTGGAGAATAATAAAATTGAGTTGGAAGAGAGAGACTTGTCCCTTCCACCACTAGAGAGTAGGAGCAACAATGTTGAGGAGGGGATTGATGTGGAAAGCCATAACAACAACCACTTCAATAATAATAATAGTTGCTTCAACAACACTGATCCTCATCATCATCATCACATTATTCACCAGGGATCATCAAAAGTAGTGGTGGAGGACCTGTTTGGGTTTGGAGGAGGAAATCATATTATTGGGCATCAAGGACAAAACTTAAAAATGGGAGAATGGGATTTGGAGGGTTTCATAATGCAAGATATTTCCTCTTTTCCTTTTCTTGATTTACAAGTTGAATAA 1095 0.41 MRKPDLMGKENNNNKMSNNNNNIVNKSKLRKGLWSPEEDEKLMRYMLSNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEDLIIHLHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRFKIGTNSSPSPNNSTDDSSSDHHQPTDHVMVGGMIMPINDHHHHDLMASMCMDSSSSTSSSISSIQAASMVFADQYDPLLFPQLHDMSFSAGFPDACFTQIGMVDGNHNHNDNENYYGILENNKIELEERDLSLPPLESRSNNVEEGIDVESHNNNHFNNNNSCFNNTDPHHHHHIIHQGSSKVVVEDLFGFGGGNHIIGHQGQNLKMGEWDLEGFIMQDISSFPFLDLQVE* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1590 364 CDD SANT 34 78 IPR001005 -
Aev08g1590 364 SUPERFAMILY Homeodomain-like 29 125 IPR009057 -
Aev08g1590 364 PANTHER TRANSCRIPTION FACTOR MYB83 14 364 - -
Aev08g1590 364 MobiDBLite consensus disorder prediction 134 151 - -
Aev08g1590 364 ProSiteProfiles Myb-like domain profile. 79 129 IPR001005 -
Aev08g1590 364 MobiDBLite consensus disorder prediction 10 27 - -
Aev08g1590 364 PANTHER MYB DOMAIN PROTEIN 55 14 364 - -
Aev08g1590 364 MobiDBLite consensus disorder prediction 134 159 - -
Aev08g1590 364 SMART sant 30 80 IPR001005 -
Aev08g1590 364 SMART sant 83 131 IPR001005 -
Aev08g1590 364 Pfam Myb-like DNA-binding domain 84 128 IPR001005 -
Aev08g1590 364 Pfam Myb-like DNA-binding domain 31 78 IPR001005 -
Aev08g1590 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 133 IPR017930 -
Aev08g1590 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 78 IPR017930 -
Aev08g1590 364 MobiDBLite consensus disorder prediction 1 27 - -
Aev08g1590 364 CDD SANT 86 129 IPR001005 -
Aev08g1590 364 Gene3D - 86 159 - -
Aev08g1590 364 Gene3D - 28 84 - -
Aev08g1590 364 ProSiteProfiles Myb-like domain profile. 26 78 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1590 Aev-Chr8 11663618 11668173 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1590 1 364 MYB Transcription Factor Family AT3G08500 47.606 1.66e-87 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev08g1590 Myb_DNA-binding 2.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1590 K09422 - gmx:100813660 346.28