Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1570 ATGGTACTTGCATCATTGCATGTTTTGGTGATGTCTCAAGCCTATTCTTCTTCTTCTTCTTCTTCTGGATCTGAGCACTTAGATTCTGATGCTGCTGCTTCAGCTGAACTCAAGCTGTACCGTGCCTTCATATTCTCCGCTCCAATCTTGTTCACTTTCATTCTCCTCTTCCTCTTCTATGCCTTCTATCTCCGTCCTCGAAGGGTCGATTGGTCCTCCCTTAGGATGCGAACACCCCTCAACCTTCCACCCAACAGTTCCACGTGTGATACGGGGTTGAAGAAAGAACTAAGGGAAATGCTGCCCATTGTTGTCTACAAGGAAAGCTTCTCTGTCAAAGATACACAATGCTCGGTATGCCTTTTGGACTACCAACCAGAGGATAGGCTTCAACAGATACCCGCGTGTGGCCATACATTTCACATGAGCTGCATTGATCTTTGGCTTGCCAGCCATAACACCTGCCCTCTCTGCCGCTTGTCCCTGCTAACTACTGCTAAATCTTCAACAGAGGCATCAAATACACAGATGCGACAGAGCAATGAAGAAACAGAGGTTACGGAACAAGAAACTGAAGCAAGATCTACTAGGCATCGAGAAATCATTGTCGCCCAGAATGTTTCTGGAGAAGTTGCAGTCGCCACACACCGCATTGACGTTGAAGGACAAAATGTGCAAAACCATCGCTAG 690 0.4681 MVLASLHVLVMSQAYSSSSSSSGSEHLDSDAAASAELKLYRAFIFSAPILFTFILLFLFYAFYLRPRRVDWSSLRMRTPLNLPPNSSTCDTGLKKELREMLPIVVYKESFSVKDTQCSVCLLDYQPEDRLQQIPACGHTFHMSCIDLWLASHNTCPLCRLSLLTTAKSSTEASNTQMRQSNEETEVTEQETEARSTRHREIIVAQNVSGEVAVATHRIDVEGQNVQNHR* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1570 229 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 18 199 - -
Aev08g1570 229 PANTHER RING-H2 FINGER PROTEIN ATL7-LIKE 18 199 - -
Aev08g1570 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 166 IPR013083 -
Aev08g1570 229 CDD RING-H2_EL5_like 116 159 - -
Aev08g1570 229 ProSiteProfiles Zinc finger RING-type profile. 117 159 IPR001841 -
Aev08g1570 229 MobiDBLite consensus disorder prediction 169 196 - -
Aev08g1570 229 Pfam Ring finger domain 116 159 IPR001841 -
Aev08g1570 229 SMART ring_2 117 158 IPR001841 -
Aev08g1570 229 SUPERFAMILY RING/U-box 101 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1570 Aev-Chr8 11365605 11371346 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1570 29 224 C3H Transcription Factor Family AT4G10150 51.244 2.45e-64 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1570 K19039 - gmx:100794211 247.284