Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1569 ATGGAAAGAGAGTGCATAAAGAAAGGGCCATGGAGTAAAGAAGAAGATGAGGTGCTCCAGAAGCATGTAAGCAAGTTTGGTCCAAGAGATTGGAGCTCCATTCGATCCAAAGGATTGTTGCTTCGAACTGGCAAATCTTGTCGTCTTAGATGGGTTAACAAGCTTAGACCCAACTTGAAGACTGGGTGCAAGTTTAGCAGAGAAGAAGAAAGGACGGTGGTAGAATTACAGGGGCAATTTGGGAACAAATGGGCGAAAATTGCAAGGGATTTGGAAGGGAGAACTGATAATGATGTAAAGAACTTCTGGAGCAGCAGGAGAAAGAGGTTGGAGAGGATGTTGCAGAGGACTACTACTTCTCCTTCAAAGCCACACAAACACAAAGGAAAAGCTCTTCTTCATCATAATAATATCAACCAACTACAACTTGAAGAGGAGCCTTCATGGTGTTCTAACAAGCCAGAGGAAACACTATCCCTATGTTGCAATTACCTTCATTACCCTATTGCTTCCTACATGGGAAACACAGAGGATGAGTTCAAGATGGTCAACCTACCAGATTTGACCAAACCAAACTACCAAAACTTGGAATCTGAACTCAATTCAATTCACATGGTGCCATCTTTTGAGTCTTCAACAACAGACTACACTTTCCCTCAACTCCCTGAACCACAAATGGAATTTCCACTGTTTCCTGAGCCACAGGACCTTGTTGTAGCAGAGGCCATTGACCCTAATAACTTCATTGATGATGTTTTTGACCACAAAAAGTGTGGGACCAGTTTGCCAAGTCTTGGATTTGGAGGAAGCTCTCAGAGTAAAAAAAGTCCAGGTGGTTTCTTTGAAGATTTCCCAGCTGAGATCTTTGATACTTTCCAATGTTCACCTCTTCAGAATTATGAAATGCTTATATTTTAG 918 0.4194 MERECIKKGPWSKEEDEVLQKHVSKFGPRDWSSIRSKGLLLRTGKSCRLRWVNKLRPNLKTGCKFSREEERTVVELQGQFGNKWAKIARDLEGRTDNDVKNFWSSRRKRLERMLQRTTTSPSKPHKHKGKALLHHNNINQLQLEEEPSWCSNKPEETLSLCCNYLHYPIASYMGNTEDEFKMVNLPDLTKPNYQNLESELNSIHMVPSFESSTTDYTFPQLPEPQMEFPLFPEPQDLVVAEAIDPNNFIDDVFDHKKCGTSLPSLGFGGSSQSKKSPGGFFEDFPAEIFDTFQCSPLQNYEMLIF* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1569 305 Gene3D - 7 60 - -
Aev08g1569 305 Pfam Myb-like DNA-binding domain 11 70 - -
Aev08g1569 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 111 IPR017930 -
Aev08g1569 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 59 IPR017930 -
Aev08g1569 305 SMART sant 61 109 IPR001005 -
Aev08g1569 305 SMART sant 7 57 IPR001005 -
Aev08g1569 305 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Aev08g1569 305 PANTHER TRANSCRIPTION FACTOR DUO1 2 295 - -
Aev08g1569 305 SUPERFAMILY Homeodomain-like 6 103 IPR009057 -
Aev08g1569 305 Gene3D - 63 135 - -
Aev08g1569 305 CDD SANT 64 103 IPR001005 -
Aev08g1569 305 CDD SANT 10 55 IPR001005 -
Aev08g1569 305 ProSiteProfiles Myb-like domain profile. 64 107 IPR001005 -
Aev08g1569 305 PANTHER MYB TRANSCRIPTION FACTOR 2 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1569 Aev-Chr8 11355040 11358599 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1569 2 297 MYB Transcription Factor Family AT3G60460 42.587 5.16e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev08g1569 Myb_DNA-bind_6 5.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1569 K09422 - gmx:121173231 324.709