Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1565 ATGGCACCAGACAGAGATGAAACCTCTTCTCAAAGTTCTTCTATATGCTCACCAGAATCAATCTCACCAATTAGTACAAAGTGCAAGCATGTGTTTGATAGATTATGTGTTTGTGCCCCTTCATGGAAGACAAGCACTACACCCAAGGGTAGAAGATTTTTCCATAGGGATGTTGAAAAAGAAGAGTTTCAATATGCTAGTACTCACTGTCTCTCATCATATTACAGTGTCTTTGTTGTTCGATTAGCAATCATGGTTATGCTAGCTATCTTGATAGGACTGCTAACTATACTGACATGGCATTTCACCAAGATTTACACAACAAAATCTCTTAATAGCTTGGCGTACGGTCTGCGATACGAGCTTCTACAACGCCCGATCTTGAGGATGTGGAACATTCTGAATTCTACTGCTGAGATTACTACAGCACAAGTGAAGTTGTCTCAGTATGTGATCAGGCGTTACAGCAACCCTGCTACTCAAGCAGAGCAAGTTGAGCTTTATGAGGCGATGAGGGCTGTAACTTGGGCACTATTTGCTAGTAGAAAAGCTCTGAACTCGATAACTATAAATTACAAGAATGGATTTGTTCAGGCATTCCACAGAGACTTGAAGGATAACAACACATTCTACATCTATTCTGATCTTTCCAATTACTCCATGGGTGCTATCAACTCGAACAAGCTCAATTCCTTTTCGACACATCAAGCTTGGGATGATGAGGCCATCCATGGTAACAAATCTGCAATTTGGTACCGCGAGCCACTCGATCCTGTTACCGGCGAGAAGATTGGAAAGGCTATGAAGATTGCACCAGAGGACTTGATCAACATAGCTGGCCTATCACAAGTACCTGATGGTGTGGCTTCGTGGCACGTTGCAGTGAGCAAGTTCACAGATTCACCTTTGCTTTCGGCTGCATTACCAGTTTGGGACTCTTCTAACAAGACTATTATGGCAGTTGTGGGTGTCACCACTGCACTTTATAGTGTAGGGCAGTTAATGAGAGAGCTTGTTGAGTTGCATAGTGGCCATATGTATTTGACTTCTCAAGAGGGTTACCTGCTTGCAACTTCCACAAGTGCACCTCTGCTTACAAACTCGACAAAGCCGCCGAAACTTAAGATGGCTGTTGACTGTGATGAAGAAGTGATAAGGCTGGGAGCAGAGTGGCTACAGAGGACTTATGGGAACCATTTTCCTCCAAGTCATGAGGTCCATGTGGAGAATGCAAAACTTGGACGCGAGCAATATTACATAGACTCATTCTTCCTGAACTTGAAGAGACTTCCTTTGGTAGGTGTAATCATCATACCAAGAAAGTATATCATGGGGCAGGTAGACGAAAGAGCATTCAAAACGTTGGTTATTCTGATATCTGCATCATTGTGCATTCTAGTCATTGGATGTGTCTGTATTTTGATACTGACAAATGGAGTGTCAAAGGAAATGAAACTAAGAGCAGAACTTATCAATCAACTTGAAGCAAGACGGAAGGCCGAGGCTTCAAGCAACTATAAAAGTCAATTTCTTGCAAACATGAGTCATGAACTGAGGACACCTATGGCAGCAGTAATTGGATTGCTTGACATTCTTATATCTGATGACTGTCTCACAAATGAACAATACTCAACAGTTACTCAAATAAGAAAATGTTCAACCGCCCTGCTCCGTCTTCTCAACAACATCTTGGATCTAAGCAAGGTGGAATCAGGAAAATTGGTCTTAGAAGATGCAGAATTTGACTTGGGACGTGAACTCGAAGGGCTTGTAGATATGTTTTCTGTGCAGTGCATTAATCACAATGTAGAGACTGTTTTAGACCTCTCTGATGATATGCCAAAGGTAGTTCGGGGTGATTCCGCTAGGGTTGTTCAAATCTTTGCAAATTTGATCAACAATTCAATCAAGTTTACCCCATCGGGTCACATTATTCTGAGAGGATGGTGTGAATACCCAAATTCTTGCAATCGTAGTCCAATTTTTCCTCTTGATCAGAAGAAATCAAGGAGTTTACAAAAAGGCAGAGAGAAGCAAAATGCAAACAACTTAAAGAGAACAATCAAGAGAGATAATAAAGTGATACTTTGGTTTGAAGTTGATGACACAGGCTGTGGTATTGACCCAAGTAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCGACTACTCGACTGCATGGAGGCACTGGTCTAGGTCTTTGCATAGTCAGAAACTTGGTTAATAAGATGGGAGGAGAAATCAAGGTTGTCAAAAAGGAGGAGCAAGGAACGTTGATGCGATTATGCTTGATTCTCAGTGTACCCTTGGATGTCACAGAACAACATTGTACATTTGATTTGACAGACAATGACTTGGTGGTACTTCTTGCATTGCAAGGCAACATGGGTCGATTAATTACATCCAAGTGGTTGCAGAAGAATGGGGTTTGCACTATGGAAGCATCTGAATGGAATGGATTAACACAAATTTTGAGGGTACTTTTTCATGCAAGAAGCTCAGTTCATAGTAAAAATAATGACTTAGATGCACATTATCATGTAAATGAGGGACTGAAGTCTAAATTACTCAGCATACAAGACATGAAGAATCCTACTTTTGTCATTGTTGTTGACATTGGGATACTTGACTTGAGCACAGATATATGGAAAGAACAACTTAACTTCCTCCACAGGTATTTTGGGAGGGCAAGGTTTGTATGGATGCTAAATCATGACACTTCCAATAATATAAAGATGGAGCTTCGTCGGAAAGGGCATGTTCTGATGGTGAACAAGCCACTTTATAAAGCGAAAATTATTCATATTTTGGAAGCTGTCATAAAGGAGAGAAATAATCTTGAGCTGCAAAAGAAAAACATAACAAATACAAGGGCTACCATGAAAGAGGGCGATTTGCATGAATTTCTTGAGATTGATTCTTCTCATTTTGATGGGGGTAGCTCTGATGATTCTGACATATCTGAAATGGTTAGTTCTAATCTTGTTAGTAGTACCAATGGAGATAAAGAAAGTGAAATGGTATCAAGATCACAACCATCATCACCATACAAGATAAATAACTGCTTAGTTGGACTAACCAATGAAAATTTTGAGGATAATAATGTGAGGAAAGAAGAGTCATGTCAGAGCAGCCCCAACTCTAGTTATGCAAATGAAGACACTGAACATAATTCTCTTGAAGCTCAAGGTGAAGATTCTGAATGTGGAGAAACAAATAAGGTTACTAGCTCAAATAAAACAGTCGATGGAAAAATATCTCTTGAGGGTTTGAGGATATTGCTTGCAGAAGATACACCAGTGCTTCAAAGGGTAGCAACCATAATGCTGGAGAAAATGGGAGCTTCTGTTGTTGCTGTAGGTGATGGACAACAAGCAGTAGAAGCTCTCAATTGCATGCTTGGCGTTGAAGATTGTAGAAAGGAGTCTCTCCAGAAGGAAAGAAACACAAGATCTCAAGCAGAGATCTTAGCTTCTCCTTCATATGACTTGATCCTAATGGATTGTCAGATGCCGAAGATGGATGGATATGAGGCAACAAAAGAAATAAGGAAATCAGAATTGGGAACAGGGTTGCACATTCCAATAGTTGCTCTAACAGCTCATGCAATGTCATGTGATGAAGCCAAATGCCTTGAGGTTGGCATGGATGCTTACTTAACCAAACCAATTGACTTCAAGCAGATGGTTTCCACCATTCTTTCACTCACAAAAAGAACATCCTCATGA 3738 0.4053 MAPDRDETSSQSSSICSPESISPISTKCKHVFDRLCVCAPSWKTSTTPKGRRFFHRDVEKEEFQYASTHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTTKSLNSLAYGLRYELLQRPILRMWNILNSTAEITTAQVKLSQYVIRRYSNPATQAEQVELYEAMRAVTWALFASRKALNSITINYKNGFVQAFHRDLKDNNTFYIYSDLSNYSMGAINSNKLNSFSTHQAWDDEAIHGNKSAIWYREPLDPVTGEKIGKAMKIAPEDLINIAGLSQVPDGVASWHVAVSKFTDSPLLSAALPVWDSSNKTIMAVVGVTTALYSVGQLMRELVELHSGHMYLTSQEGYLLATSTSAPLLTNSTKPPKLKMAVDCDEEVIRLGAEWLQRTYGNHFPPSHEVHVENAKLGREQYYIDSFFLNLKRLPLVGVIIIPRKYIMGQVDERAFKTLVILISASLCILVIGCVCILILTNGVSKEMKLRAELINQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKVVRGDSARVVQIFANLINNSIKFTPSGHIILRGWCEYPNSCNRSPIFPLDQKKSRSLQKGREKQNANNLKRTIKRDNKVILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGEIKVVKKEEQGTLMRLCLILSVPLDVTEQHCTFDLTDNDLVVLLALQGNMGRLITSKWLQKNGVCTMEASEWNGLTQILRVLFHARSSVHSKNNDLDAHYHVNEGLKSKLLSIQDMKNPTFVIVVDIGILDLSTDIWKEQLNFLHRYFGRARFVWMLNHDTSNNIKMELRRKGHVLMVNKPLYKAKIIHILEAVIKERNNLELQKKNITNTRATMKEGDLHEFLEIDSSHFDGGSSDDSDISEMVSSNLVSSTNGDKESEMVSRSQPSSPYKINNCLVGLTNENFEDNNVRKEESCQSSPNSSYANEDTEHNSLEAQGEDSECGETNKVTSSNKTVDGKISLEGLRILLAEDTPVLQRVATIMLEKMGASVVAVGDGQQAVEALNCMLGVEDCRKESLQKERNTRSQAEILASPSYDLILMDCQMPKMDGYEATKEIRKSELGTGLHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKQMVSTILSLTKRTSS* 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1565 1245 Pfam Response regulator receiver domain 1096 1236 IPR001789 GO:0000160
Aev08g1565 1245 Gene3D - 494 573 - -
Aev08g1565 1245 SMART HKATPase_4 619 771 IPR003594 -
Aev08g1565 1245 CDD REC_hyHK_CKI1_RcsC-like 1096 1236 - -
Aev08g1565 1245 PRINTS Bacterial sensor protein C-terminal signature 696 710 IPR004358 GO:0016310|GO:0016772
Aev08g1565 1245 PRINTS Bacterial sensor protein C-terminal signature 714 724 IPR004358 GO:0016310|GO:0016772
Aev08g1565 1245 PRINTS Bacterial sensor protein C-terminal signature 731 749 IPR004358 GO:0016310|GO:0016772
Aev08g1565 1245 Gene3D - 574 774 IPR036890 -
Aev08g1565 1245 PANTHER OSMOSENSOR HISTIDINE KINASE 25 1241 - -
Aev08g1565 1245 SUPERFAMILY CheY-like 1092 1241 IPR011006 -
Aev08g1565 1245 SMART REC_2 1094 1236 IPR001789 GO:0000160
Aev08g1565 1245 Gene3D - 1073 1243 - -
Aev08g1565 1245 MobiDBLite consensus disorder prediction 988 1017 - -
Aev08g1565 1245 Pfam His Kinase A (phospho-acceptor) domain 507 572 IPR003661 GO:0000155|GO:0007165
Aev08g1565 1245 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 561 767 IPR036890 -
Aev08g1565 1245 MobiDBLite consensus disorder prediction 981 1017 - -
Aev08g1565 1245 SMART HisKA_10 506 572 IPR003661 GO:0000155|GO:0007165
Aev08g1565 1245 PANTHER TWO-COMPONENT HISTIDINE KINASE 25 1241 - -
Aev08g1565 1245 MobiDBLite consensus disorder prediction 1043 1060 - -
Aev08g1565 1245 MobiDBLite consensus disorder prediction 1 20 - -
Aev08g1565 1245 CDD HisKA 507 568 IPR003661 GO:0000155|GO:0007165
Aev08g1565 1245 Coils Coil 940 960 - -
Aev08g1565 1245 MobiDBLite consensus disorder prediction 1037 1081 - -
Aev08g1565 1245 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 619 767 IPR003594 -
Aev08g1565 1245 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 494 573 IPR036097 GO:0000155|GO:0007165
Aev08g1565 1245 ProSiteProfiles Response regulatory domain profile. 1095 1240 IPR001789 GO:0000160
Aev08g1565 1245 ProSiteProfiles Histidine kinase domain profile. 513 771 IPR005467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1565 Aev-Chr8 11328886 11335820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1565 27 1244 Histidine Kinase Gene Family AT2G17820 64.553 0.0 1571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev08g1565 HATPase_c 4.7e-23 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1565 - - gmx:100814068 2045.4