Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1560 ATGGCTGGAGGTGATAGTCTGGCGCTGATGAAAAAGATGATGAGGGAAGAAGGGGAGGCGTTCGACGATGTGCCGACCTCCCCTGCTGTTTCTGGTTCGGTGGTGGCGCCGACTGGATCCGACTTGGGGGGGAAACCCAGTTCCTCTGAGAAAACGACCTCTGATGTTCCACCAACTAAAAAGCAAAAGACAGCTGCCAAAGGGGTCTCTACTCTGAAACCTCCATCACTTTCCGACTTCACGACTCTGAGCGTGTTCAAGAACAACTTTCCTACCCCACAGTTTATCGATACGACCCTGTGCCACAAAGAGGTCTGTAACCTTTTGAGCAAGAGTTCCGCCGTCCCGGCTTTACAGACGGTTGAGAGGTCTCTGTTGCAATCTGCCACTACCCTCCGATTCTGGGAGTCGGTGGTTTCAGATGCTGAGGTTCTTAAGCGCCGAGTCGCTCAATATGTTACTAAGATCGAAGAGCTTCAAACTTGCATCCGTACACTAGAAGAGACCGTAGAGAAGGCTAAGCATCTTGCTTCGGTTCAAGAAGAGACATACTATTCTGAGGGGACCAGAATGGATGCTTTGTCCATTCAATTTGTCACTGCTGATGCATGGTGTTTGATGCTATGGTGTTGTGAAATTTGTGCCGATGCAGAGGGTGTTTGCTATGCAAAGAAGGACTTCAATTTAGCGAAGCACCGGAGATTGATGTGCCAAATGCCCAAATCTACAGAACAAGCCAAGCCTGCTGGTAGTAGACCATTTGGTGGTCCACCGGGTGATCGCCCTAGGGGTCCACCACGCTTTGAAGGAGAGCGTAGGTTTGGTGACCGTAATAGATACCGTGGAGGTCCCCGAGGATCTGGTGGTGACTTTGGAGGAGACAAGGGAGGAGCCCCTGCTGACTACAGGCTTTCTTTTGGGCTTTGTATCTGCTTCGCAAATTTCATGGAATGA 954 0.5042 MAGGDSLALMKKMMREEGEAFDDVPTSPAVSGSVVAPTGSDLGGKPSSSEKTTSDVPPTKKQKTAAKGVSTLKPPSLSDFTTLSVFKNNFPTPQFIDTTLCHKEVCNLLSKSSAVPALQTVERSLLQSATTLRFWESVVSDAEVLKRRVAQYVTKIEELQTCIRTLEETVEKAKHLASVQEETYYSEGTRMDALSIQFVTADAWCLMLWCCEICADAEGVCYAKKDFNLAKHRRLMCQMPKSTEQAKPAGSRPFGGPPGDRPRGPPRFEGERRFGDRNRYRGGPRGSGGDFGGDKGGAPADYRLSFGLCICFANFME* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1560 317 MobiDBLite consensus disorder prediction 18 71 - -
Aev08g1560 317 PANTHER 40S RIBOSOMAL PROTEIN S10 218 232 IPR037447 -
Aev08g1560 317 PANTHER 40S RIBOSOMAL PROTEIN S10 245 307 IPR037447 -
Aev08g1560 317 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 245 307 - -
Aev08g1560 317 MobiDBLite consensus disorder prediction 264 280 - -
Aev08g1560 317 Coils Coil 149 183 - -
Aev08g1560 317 MobiDBLite consensus disorder prediction 42 71 - -
Aev08g1560 317 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 218 232 - -
Aev08g1560 317 MobiDBLite consensus disorder prediction 240 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1560 Aev-Chr8 11242123 11270554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1560 203 303 Cytoplasmic Ribosomal Protein Gene Family AT5G41520 46.078 8.79e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1560 K02947 K09422 csv:101212088 65.0846