Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1540 ATGACAAATCACGGTGCGGCATCCTCTGATTCCTCCTCGTACGATGTTTTCCTGAGTTTCAGAGACGGAGATGACTCCGCATTCAGTGATTTTCTCTACGAAGCTTTGCTCGAGGTAGGAATCGTCAAGACCTTCAGAGACTTAGAGAAGCAGAGGGATGAAATCATAGACAAAATCGAAGCATCCAAGATGTCTATGGTTGTGTTCTGCAAAGACTACGCTTCTTCCCCAAGGTGCCTTGACGAACTCGCCAAGATCGTTGAGTGTTTCGATACCCAAAACAAACCGATTCATCCAGTTTTCTACAAAGTGGCTCCATCAGATGTTCGGTGGCAGAGAAATTCCTACGAAATAGCGATGAGTGAGCATGAGAAGGTGTTTGGGAAAGACTCGGAGAAGGTGAAATCGTGGAGATCAGCTCTGTATAGAGTTGGGGATCTAAGTGGAGAACATATCACTCACAATGAGTATGAAGCAGAGGTTATCCAGAAGATAGCTAAAGACACCTATGCTAAATTGCCTCCAATGCCTTTAGAAACTAAACGTGTAATTGGGTTCGATTCTCGCTTTGAGAAAATGAAACCGCTCATAGATCTCAACTCTAATGATAAAATTCGCATGATAGGAATTTATGGACCTAGTGGCATTGGAAAAACCACATTTGTTGCACATATGTATAACAAGATCAGGAGTCAATTTCAGGGTGCAAGTTTCATAGGTGACATCACAAAAAAATCAAAACTTTTGGAAGATCTTCAAACGACCCTTCTATCTGAGATGAATGAGAAGATCAGAGGAACCACCAGGGGAAACAGGGATGATGGATGCCAAGAAATCCGAAGCAAACTAGGGAATAGACGAGTTCTTCTAGTCCTAGATGATGTTGATAATGTTAAACAGTTAGAGGCGCTGGCCGGAGCTGAAAAGTGGTTTGGTTCAGGTAGCAGGATCATTATAACAACACGAGAAAAAGGAGTGCTGAATAAACATGAAGTCAAGATTGAGAAATATGAAATGAAGAAGCTAGATGATCATGAATCTCTCCAACTCTTTTGTTGGCATGCCTTTGGTATGAGCCAACCTGCACAAGACTTTGAAGAAATCTCTGCTCGTGCAGTGAGTTTTGCAAACGGTGTTCCTTCCGCTTTGAAAGTGATAGGCTCAAATTTGAAGGGGTTAAGCATAGAGGAATGTGATATGGAATTGGACAAATATAAAAATGTTCCAAATTCATTCCCTTTTCTGCTAGGTTCTTTCTAA 1260 0.4167 MTNHGAASSDSSSYDVFLSFRDGDDSAFSDFLYEALLEVGIVKTFRDLEKQRDEIIDKIEASKMSMVVFCKDYASSPRCLDELAKIVECFDTQNKPIHPVFYKVAPSDVRWQRNSYEIAMSEHEKVFGKDSEKVKSWRSALYRVGDLSGEHITHNEYEAEVIQKIAKDTYAKLPPMPLETKRVIGFDSRFEKMKPLIDLNSNDKIRMIGIYGPSGIGKTTFVAHMYNKIRSQFQGASFIGDITKKSKLLEDLQTTLLSEMNEKIRGTTRGNRDDGCQEIRSKLGNRRVLLVLDDVDNVKQLEALAGAEKWFGSGSRIIITTREKGVLNKHEVKIEKYEMKKLDDHESLQLFCWHAFGMSQPAQDFEEISARAVSFANGVPSALKVIGSNLKGLSIEECDMELDKYKNVPNSFPFLLGSF* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1540 419 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 18 409 - -
Aev08g1540 419 PRINTS Disease resistance protein signature 207 222 - -
Aev08g1540 419 PRINTS Disease resistance protein signature 282 296 - -
Aev08g1540 419 PRINTS Disease resistance protein signature 376 390 - -
Aev08g1540 419 CDD AAA 210 322 - -
Aev08g1540 419 ProSiteProfiles TIR domain profile. 12 173 IPR000157 GO:0007165
Aev08g1540 419 Pfam TIR domain 14 179 IPR000157 GO:0007165
Aev08g1540 419 Gene3D - 341 413 IPR042197 -
Aev08g1540 419 Gene3D - 172 338 IPR027417 -
Aev08g1540 419 Pfam NB-ARC domain 200 391 IPR002182 GO:0043531
Aev08g1540 419 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 409 IPR044974 GO:0006952
Aev08g1540 419 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 149 IPR035897 -
Aev08g1540 419 SMART till_3 13 147 IPR000157 GO:0007165
Aev08g1540 419 Gene3D - 6 171 IPR035897 -
Aev08g1540 419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 409 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1540 Aev-Chr8 10963757 10965736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1540 9 388 WRKY Transcription Factor Family AT4G12020 27.604 1.62e-32 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1540 - - gmx:100800797 395.971