Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1539 ATGATGGTTCGCTCTCATGGCGTCAAGCTTCTTCACTGGGCTACTCGTCGATCGTTTTATCACTCCAAGGATTTCGTATATCAAGCAGTGTTTCAAAGGGGTTATAGGGCACTGAATTCTGGGCTTTGCAATCCATCAACAGTTATTGGATGTTATACGCCAGCTGTTGGAGATGGTGCAAATTTGAAGAACTGGTTGCTATTGGGAGTGGCAAATACATATTGGGGATCTTCTAGATCAATTCATGGCTCGGCATCATTGGCAAGAGACTATTATGATGTTCTTGGTGTGAGTAGGAATGCAAGTTCTTCTGATATAAAGAAAGCTTACTATGGGCTAGCAAAGAAGCTCCATCCAGACACAAACAAGAATGATCCTGAGGCTGAAAAGAAGTTTCAAGAAGTTACTATGGCATATGAGGTTTTGAAGGATGAGGAGAAGCGTCAACAATATGATCAGGTTGGGCATGATGCCTATGTGAACCAACAATCCACTGATTTTGGAGGCCAGAGTGGCTTTAATCCTTTTGAGCAGATATTCCGTGATCATGATTTTGTCAAGAGCTTTTTCCATCAGAATATTGGTGGAGAGGATGTCAAGACTTTCATTGAACTGAGTTTCATGGAAGCTGTCCAAGGGTGCACCAAAACTGTGACATTTCAAACAGATGTAATGTGTAATACTTGTGGTGGGAGTGGTGTTCCTCCTGGTACAAGACCTGAAACTTGTAAGAGATGTAAAGGGTCAGGAATGACATATGTACAAGCTGGCATATTTAGGATGGAGAGTACCTGTGGTACCTGTAAGGGAACTGGACAAATTGTATCAAATTATTGCAAGTCTTGCAGGGGTGCAAAGGTCATTAGAGGAACAAAGTCAGTCAAGTTGGATACTGTGCCTGGAATAGACAATAATGAGACCATTAAGATTTATAGAAGTGGTGGAGCAGATCCTGAGGGAGGTCAGCCTGGTGATCTTTATGTTACTATTAAGGTTAGGGAAGACCCTGTTTTCCGAAGAGAAGGATCTGATATTCATGTTGATGCTGCTTTAAGTATAACCGAGGCGATTTTAGGGGGAAGCATTCAGGTTCAAACTCTTACTGGAGATGTTGTTCTTAAGGTTCGCCCAGGCACCCAACCTGGCCAAAAAGTGGTTTTAAAAAATAAAGGGATCAAAACAAAGAATTCTTACACGTTTGGCAATCAGTATGTTCATTTTAATGTCATCATCCCAACAAACCTGACACCAAGGCAGCACGAACTGATCGAAGAGTTCGCTAAGGAAGAGCAAGAGGAGCTTGATAAACGGAAAACTGCATCAGCTTCTAGTTGA 1335 0.4202 MMVRSHGVKLLHWATRRSFYHSKDFVYQAVFQRGYRALNSGLCNPSTVIGCYTPAVGDGANLKNWLLLGVANTYWGSSRSIHGSASLARDYYDVLGVSRNASSSDIKKAYYGLAKKLHPDTNKNDPEAEKKFQEVTMAYEVLKDEEKRQQYDQVGHDAYVNQQSTDFGGQSGFNPFEQIFRDHDFVKSFFHQNIGGEDVKTFIELSFMEAVQGCTKTVTFQTDVMCNTCGGSGVPPGTRPETCKRCKGSGMTYVQAGIFRMESTCGTCKGTGQIVSNYCKSCRGAKVIRGTKSVKLDTVPGIDNNETIKIYRSGGADPEGGQPGDLYVTIKVREDPVFRREGSDIHVDAALSITEAILGGSIQVQTLTGDVVLKVRPGTQPGQKVVLKNKGIKTKNSYTFGNQYVHFNVIIPTNLTPRQHELIEEFAKEEQEELDKRKTASASS* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1539 444 ProSitePatterns Nt-dnaJ domain signature. 132 151 IPR018253 -
Aev08g1539 444 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 29 442 - -
Aev08g1539 444 Gene3D - 226 286 - -
Aev08g1539 444 CDD DnaJ 90 144 IPR001623 -
Aev08g1539 444 Gene3D - 199 328 - -
Aev08g1539 444 Gene3D DnaJ domain 87 198 IPR036869 -
Aev08g1539 444 ProSiteProfiles dnaJ domain profile. 90 155 IPR001623 -
Aev08g1539 444 PANTHER DNAJ-CLASS MOLECULAR CHAPERONE 29 442 - -
Aev08g1539 444 Pfam DnaJ C terminal domain 202 412 IPR002939 -
Aev08g1539 444 CDD DnaJ_zf 226 286 IPR001305 GO:0031072|GO:0051082
Aev08g1539 444 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 213 289 IPR036410 -
Aev08g1539 444 Pfam DnaJ domain 90 152 IPR001623 -
Aev08g1539 444 SUPERFAMILY Chaperone J-domain 89 191 IPR036869 -
Aev08g1539 444 SUPERFAMILY HSP40/DnaJ peptide-binding domain 337 423 IPR008971 GO:0006457|GO:0051082
Aev08g1539 444 Hamap Chaperone protein DnaJ [dnaJ]. 87 439 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Aev08g1539 444 PRINTS DnaJ domain signature 147 166 IPR001623 -
Aev08g1539 444 PRINTS DnaJ domain signature 127 147 IPR001623 -
Aev08g1539 444 PRINTS DnaJ domain signature 92 110 IPR001623 -
Aev08g1539 444 PRINTS DnaJ domain signature 110 125 IPR001623 -
Aev08g1539 444 SMART dnaj_3 89 147 IPR001623 -
Aev08g1539 444 SUPERFAMILY HSP40/DnaJ peptide-binding domain 196 335 IPR008971 GO:0006457|GO:0051082
Aev08g1539 444 CDD DnaJ_C 197 415 - -
Aev08g1539 444 Pfam DnaJ central domain 226 286 IPR001305 GO:0031072|GO:0051082
Aev08g1539 444 ProSiteProfiles Zinc finger CR-type profile. 213 291 IPR001305 GO:0031072|GO:0051082
Aev08g1539 444 Gene3D - 334 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1539 Aev-Chr8 10947844 10961027 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1539 84 152 C2H2 Transcription Factor Family AT1G74250 40.541 1.19e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1539 K03686 - gmx:100799735 781.171