Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1508 ATGACAGATCCTCATCATCACTCGAATTTAGATGAATGGTTCAACTTCATACCCCTCCACCCTCATCACCACTACTCATCTTCTCATCAATCAAATTTATATTCCTCCTCCTCCTCATACCCATTTGCATACTCAAACAACAGATTTGGAACAATAACTCATCAATCATCCGAAGCCTCATCATCATCATCATTATCATTATCTTCCCCTCCTCCTCCTCCTGTCAGAGAGGCACTTCCTCTTATAAACAAGCTAAGCCTAGCCAATCATCACCATGAAAATTATTGTTATGAACCCTCAAACAGGTCACCAGTGGTGGTAGAAAAAGTGGAAAAAGATGTATGTCTTTTGCTGAAAGGTACTAATAATAAAGAAGATGCTGTGACTGTTGCACTTTGCATAGGGCTTCCAAGAATGGATGTTTCTTCTTCTTCTACTACTACTTATGATGATAAAGTAGTCTCAATTAATAGTAGTAATTCTGTGGAAATGGCTGAAAAGGAGGAATTCAAGAATGTGATTTCTGAACAACAACAGCCTTTGGAGACACTGAACAAGGGTCAGTATTGGATTCCCACCCCTTCACAGATTCTAATTGGTCCTACACTATTCTCATGTCCTCTGTGCTCTAAAACTTTCAACAGATACAATAATCTTCAGATGCATATGTGGGGACACGGATCTCAATACAGAAAGGGTCCTGATTCTCTGAAAGGAACACAGCCAACAGCTATGCTAAGGCTTCCATGCTATTGCTGTGCACCCGGGTGCAAGCACAACATAGAGCACCCAAGAGCTAAACCCCTGAAGGATTTCAGAACACTCCAAACTCATTACAAAAGGAAGCATGGCATAAAGCCCTACATGTGCAGGAAATGCGGTAAGGCATTTGCTGTGAAAGGTGATTGGAGGACACATGAGAAGAACTGTGGCAAAATATGGTACTGTTTGTGTGGCTCTGATTTCAAGCACAAGAGGTCTCTCAAAGATCATATCAAAGCTTTTGGGTTTGGCCATGGTGCTTTTGGGATTCATTCTTGGCAAGAATTCGAAGATGAAGGACCATCTGAAGTTGAACATGATCATGGGGAGGAGAGCTCATTGTGA 1107 0.4155 MTDPHHHSNLDEWFNFIPLHPHHHYSSSHQSNLYSSSSSYPFAYSNNRFGTITHQSSEASSSSSLSLSSPPPPPVREALPLINKLSLANHHHENYCYEPSNRSPVVVEKVEKDVCLLLKGTNNKEDAVTVALCIGLPRMDVSSSSTTTYDDKVVSINSSNSVEMAEKEEFKNVISEQQQPLETLNKGQYWIPTPSQILIGPTLFSCPLCSKTFNRYNNLQMHMWGHGSQYRKGPDSLKGTQPTAMLRLPCYCCAPGCKHNIEHPRAKPLKDFRTLQTHYKRKHGIKPYMCRKCGKAFAVKGDWRTHEKNCGKIWYCLCGSDFKHKRSLKDHIKAFGFGHGAFGIHSWQEFEDEGPSEVEHDHGEESSL* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1508 368 Gene3D Classic Zinc Finger 265 337 - -
Aev08g1508 368 PANTHER TESTA 1 PROTEIN, PUTATIVE-RELATED 1 362 - -
Aev08g1508 368 PANTHER ZINC FINGER PROTEIN WIP2 1 362 IPR043584 GO:0003700|GO:0010468
Aev08g1508 368 Gene3D Classic Zinc Finger 203 226 - -
Aev08g1508 368 SUPERFAMILY beta-beta-alpha zinc fingers 198 226 IPR036236 -
Aev08g1508 368 SMART c2h2final6 288 308 IPR013087 -
Aev08g1508 368 SMART c2h2final6 204 226 IPR013087 -
Aev08g1508 368 ProSitePatterns Zinc finger C2H2 type domain signature. 206 226 IPR013087 -
Aev08g1508 368 ProSiteProfiles Zinc finger C2H2 type domain profile. 204 231 IPR013087 -
Aev08g1508 368 SUPERFAMILY beta-beta-alpha zinc fingers 274 308 IPR036236 -
Aev08g1508 368 ProSiteProfiles Zinc finger C2H2 type domain profile. 288 308 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1508 Aev-Chr8 10674701 10679943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1508 158 368 C2H2 Transcription Factor Family AT3G57670 74.882 1.19e-117 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev08g1508 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1508 - - gmx:100794446 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1508 08 10674701 10679943 Aev08g1508 08 10674701 10679943 ECH