Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1436 ATGGTGAATCACAGAGGAAAAAAAAACTTTAGTGCTAGGGAGGTGGTGATTCAGGTCCCGGCCAAGTTGCCGGAGGTGTTCGCGGATGCTGTGAAGCGGTTCGTCCATCTTGTAGACGCGGTTCGACGAGGTGGTGACGCGGTTCGGTCTCTCTGTGGTTGTGTTTATATGTTTAGAAGTGTTGCAATGGAGAGCATGATTTTTGAAGATTGTGATGATATAAGTAGTGAAAAAAGTAGCGGGTGTAGGTGTGAAAAGAGTAACGAGGAATCTAACACCTCTTCTTCTGATTGGTCTGATGAAGAAGAAGTAGAAAACCGCAGTGTTGAGATTAGGCAGAAAACAAATGTGAGGGAAAGTGAAAAGTTGAAAGAGAAAATATCAACCAATGACTATTGCTGTACTGATGTAGTCCAAGTAACTGCTGCTGACTTTGATGGTCGAGAGTTTAAAAGTGAAGATGAAGCGTATGAGTTATATGTGAAATATGCTAGAGTAGTTGGATTTGGGGTAAGGAAAAGTGATGTTGCTCGTGACAGAAATGGTCGACGATGTAGGCGGAAGTTTGTGTGTAGTCGTGCAGGTCTTAGAGATGAAAAGCATTATAACAAAGATGATAGGAAGCGCGAGCACAAGGCAGAGAGAAGAACTAATTGCAGTGCTAGGTTGATGATTTACCGGAGTAAGAGGATGGGTGTTTGGCGAGTGCGGAAATTGATCGTGGAGCACAATCATGAGTTGACCATGCAGTATTTCGCTCATCTCATACCAAACCATCGTCGAATCAACACTGGGGAGAAGGTACAAATAGGGACAATGCATAGATATGGGATGCAGACTTCCCAAATAATGGGCTTCATGGCTGGCCAATCGGGGGGTTATCGAAGATTAGGATTTTCTAAGAAGGATTTATATAACTACATTGATCGTGATAGGAGAGGTAAAATTGTTGATGGCGATGCTGAAGCAGCAATAAGCTACTTGGAGAGCAGGGCTGATTGTGATGGACTTACTCTTGCTAGGTGGGTTGTTAGTGCATACGAGAAGAAAGAAATGTGGGCAACTGCTTATTTGAGGGGGAAATTCTCAGCTGTAATTAGGACAACATCTCGATGTGAGGGAATTAACTATTTCATTAAAAGGTTTATTAAGTCGAGGTATAACATTTTGGATTTGGTTCAAAGCCTTGAAAGAGTTTTGAAGGAGTACAGGAACAACGAGTTGGAGGCGCAATTCCGTTCTATTTATACATGGCCTGTTCTAACAACGGGGTTGCGGTCAATTGAGGAAGGGGCTGCAAGGGTTTACACTGGCGCCATATTCAAGGAGGTAAGGAAGGAGATTGAGCATGTATGTTCATTGGTTCTTGTTAATCGTACGAGAATGTCAACTAGTGTTGCGTACAGGTTGTGCAAATCTGGCAAGCCTGATCGCATATTTGAAGTCCTTTATGATAGTAATGGGGACAAGGATGGGGCAAAGGTAGAATGCAAATGTTGTTACTGGAACATGAATGGCATTCTTTGCAGACATATGTTTTTTGTTATGAAGGAGGAACACATATGTGAGATGCCCAAAAGCATGATAAAGAGACGTTGGTGCAAGGATGCAAAGGTGTTTGAGGATAACGGGGACGATGATGATATCGGAAGAACACAAATATTGCGGCGAGCAGCACTTGCTGCAGCAAGCGGGTGGATGACTTTCCTTGGGAGTGAGAGTAGAATGGCTTTTCGAACAACGATGGATGGAATAGAGTCCATAACTTCCAAGCTTGAAAGTGGTATGTATTTTGGAAAGGGTGTTGCAGCAGCCTCAGAATCAAATAAAATTGGTGACCCAAACATGTCGAAGACAAAGGGAGCCCCAAGGAAAGGGAAGATGGGTTTAAAGAAACGTTGTTGCTCGAATTGCGGTGAAGGTGGTCACACAAAGAGAACTTGCCCAAATAGTAAAGAGGCTGACGAGCCTAATACTGATGATGAATATGATGCTCAAGATCGTGGAGTGGAAACAAGCGAGACTGCCATGAATGTAAGAAGTACGCAAAAGTCAACAGCTGGCATGCACAATGATGGGGTGGGTTGTGTAAATCAAGGGGTTGACATTTCAAGTGTTGAAAGGCAGTTCCATCATGTTGGTAGTGGGAATATCTTCATTGGTGGGCATCATATTAATCAAAATTTCTCTTACAGTGGTCACTACCAAACTGAGGTAAGTCCGTTTAATGGACACCAATCCGCCGGTGGAAATGGTAGTATTTCTTGTGACCGTGGACACCAATGGTTGCTACAGAACTTTATCGGCAGTCAACATGGTGCAGATAGAGCAACGTTGTGA 2340 0.4338 MVNHRGKKNFSAREVVIQVPAKLPEVFADAVKRFVHLVDAVRRGGDAVRSLCGCVYMFRSVAMESMIFEDCDDISSEKSSGCRCEKSNEESNTSSSDWSDEEEVENRSVEIRQKTNVRESEKLKEKISTNDYCCTDVVQVTAADFDGREFKSEDEAYELYVKYARVVGFGVRKSDVARDRNGRRCRRKFVCSRAGLRDEKHYNKDDRKREHKAERRTNCSARLMIYRSKRMGVWRVRKLIVEHNHELTMQYFAHLIPNHRRINTGEKVQIGTMHRYGMQTSQIMGFMAGQSGGYRRLGFSKKDLYNYIDRDRRGKIVDGDAEAAISYLESRADCDGLTLARWVVSAYEKKEMWATAYLRGKFSAVIRTTSRCEGINYFIKRFIKSRYNILDLVQSLERVLKEYRNNELEAQFRSIYTWPVLTTGLRSIEEGAARVYTGAIFKEVRKEIEHVCSLVLVNRTRMSTSVAYRLCKSGKPDRIFEVLYDSNGDKDGAKVECKCCYWNMNGILCRHMFFVMKEEHICEMPKSMIKRRWCKDAKVFEDNGDDDDIGRTQILRRAALAAASGWMTFLGSESRMAFRTTMDGIESITSKLESGMYFGKGVAAASESNKIGDPNMSKTKGAPRKGKMGLKKRCCSNCGEGGHTKRTCPNSKEADEPNTDDEYDAQDRGVETSETAMNVRSTQKSTAGMHNDGVGCVNQGVDISSVERQFHHVGSGNIFIGGHHINQNFSYSGHYQTEVSPFNGHQSAGGNGSISCDRGHQWLLQNFIGSQHGADRATL* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1436 779 ProSiteProfiles Zinc finger CCHC-type profile. 635 650 IPR001878 GO:0003676|GO:0008270
Aev08g1436 779 MobiDBLite consensus disorder prediction 642 667 - -
Aev08g1436 779 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 113 327 IPR031052 GO:0006355
Aev08g1436 779 ProSiteProfiles Zinc finger SWIM-type profile. 480 520 IPR007527 GO:0008270
Aev08g1436 779 MobiDBLite consensus disorder prediction 78 105 - -
Aev08g1436 779 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 340 689 - -
Aev08g1436 779 Pfam FAR1 DNA-binding domain 159 248 IPR004330 -
Aev08g1436 779 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 340 689 IPR031052 GO:0006355
Aev08g1436 779 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 113 327 - -
Aev08g1436 779 SUPERFAMILY Retrovirus zinc finger-like domains 620 653 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1436 Aev-Chr8 9974944 9978855 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev08g1436 FAR1 1.8e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1436 - - adu:107478967 318.161