Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1420 ATGGGATTGAAAAACCTGGGGCTATTTGTATCATTCATCACAGAAGGCTGGGAAAAAGCATTCTTCACTGCTAAATTTTTATGTTTTCTACACGTCACCAACACCTACTTGGTTACCCCTCATCAGACATATGGTCCCAGCATGCTTCCTACAATAGATTTGAGGCCCAGTGTGATGTTGGCTGAAAAAGTTTCAACTCGATTTGGTAAAGTTTCTCGCGGAGATATCATATTTCTGCGGTCGCCTCAAAACCCTAGGAAGGTCATCTGCAAACGCTTGATTGGAATGGAGGGTGATACTGTTACTTACATTTCCAACCCCGAGAATGGTGATGATAAGCCTGAAACTGTTGTGGTTCCAAAGGGGTACATTTGGGTACAGGGGGACAACGCATATACCAGCACTGATTCAAGAAATTTTGGTTCCGTTCCTTATGGACTTATTCAGAGCAGGATGTTCTGGAGGGTATTGCCAGTTGAAAATTTTGGACCTTTCTGGAAACATTGA 507 0.43 MGLKNLGLFVSFITEGWEKAFFTAKFLCFLHVTNTYLVTPHQTYGPSMLPTIDLRPSVMLAEKVSTRFGKVSRGDIIFLRSPQNPRKVICKRLIGMEGDTVTYISNPENGDDKPETVVVPKGYIWVQGDNAYTSTDSRNFGSVPYGLIQSRMFWRVLPVENFGPFWKH* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1420 168 Gene3D Umud Fragment, subunit A 33 167 - -
Aev08g1420 168 SUPERFAMILY LexA/Signal peptidase 35 166 IPR036286 -
Aev08g1420 168 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 1 167 - -
Aev08g1420 168 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 1 167 - -
Aev08g1420 168 CDD S26_SPase_I 45 151 IPR019533 GO:0004252|GO:0006465
Aev08g1420 168 ProSitePatterns Signal peptidases I signature 3. 124 137 IPR019758 GO:0004252|GO:0016021
Aev08g1420 168 Pfam Signal peptidase, peptidase S26 26 103 IPR019533 GO:0004252|GO:0006465
Aev08g1420 168 Pfam Signal peptidase, peptidase S26 115 153 IPR019533 GO:0004252|GO:0006465
Aev08g1420 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aev08g1420 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 36 52 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aev08g1420 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 119 138 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1420 Aev-Chr8 9724264 9725920 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1420 48 165 MADS-box Gene Family AT1G29960 51.695 1.13e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1420 K09647 - gmx:100805997 206.838