Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1384 ATGGCATCTTCAAATTCACCATGCGCAGCATGCAAATTCCTACGCCGAAAGTGCCAACCAGAGTGTGCTTTCGCACCTTACTTCCCACCCGATCAGCCCCAAAAGTTCGCTAACGTTCACAGAATATTCGGCGCAAGCAACGTAACGAAGCTCCTCAACGACTTACACCCTCACCAGCGTGAAGACGCCGTTAACTCCCTCGCTTACGAAGCAGAGATGAGGCTTCGCGACCCTGTTTATGGCTGCGTCGGCGTTATCTCTCTTCTTCAGCACCAACTTCGCCAATTACAGATGGACCTTTATTGTGCCAAATCTGAGCTTTCTAGGTACCAAAATTTGACTATAACTGCAACAAACCACCACAGCAGTTTTATTACTGCCATGGCTGATTCTGCTGCCACGACGGCGTACCACCATCACCACGCTGCACAGAGCGTGGGTGCTGGTGGTGGTAATGACGCTCGTGACAGCAATAATAATAATAATAATAGTAATAACTATTATTATCACCACCACCATCACCATCAGTTCTTTCCGAGGGACCACCAGCAACAGGTGGTTAGAAGCTTTGATGTTGGAGGAGGGAACAACTATGATGCTAGTCTCTTGGCTATGAACATCTCTGCTAGCTTAGGGCAGCTTAATCAGCTCCAACAGCATAGCGCTGCCGGCGGCGGTGGTGACGACCGCCGTACCGTCAATCCCTCCTAG 711 0.4979 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQNLTITATNHHSSFITAMADSAATTAYHHHHAAQSVGAGGGNDARDSNNNNNNSNNYYYHHHHHHQFFPRDHQQQVVRSFDVGGGNNYDASLLAMNISASLGQLNQLQQHSAAGGGGDDRRTVNPS* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1384 236 MobiDBLite consensus disorder prediction 136 169 - -
Aev08g1384 236 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Aev08g1384 236 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Aev08g1384 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 193 - -
Aev08g1384 236 MobiDBLite consensus disorder prediction 151 167 - -
Aev08g1384 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 3 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1384 Aev-Chr8 9173976 9174686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1384 2 236 AS2 family AT1G65620 61.702 3.20e-83 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev08g1384 LOB 3.7e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1384 - - mtr:MTR_8g040900 340.117