Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1371 ATGGATGAAAATTCAAATGGGGAAATTTCAATGGAGGAAAATGTTGATTTACTTGATCAGATTGTTAGCGAAAAGATGCTTGAGGTCCATAATACCTGTTCAATTCAGAAGGGAGAGTATCCACAAATGGGAATGCGATTCATTTCAGATCACGATGCAAATTTTTTTTATTCAAACTATGCAAAGAAAGTTGGATTTTCTTCTAGAACACGTTCCTCCAAGAAATATGTTGATGGAACCGTTAAACAAAGAACATATACATGTGGCAGAGAGGGTACAAGGGGGTCTGTTGCTGCCAGTTTGGAGAAGAACAAACTCATATCAGCAGCAAATTGCAAGGCAAGGATGGTGGTCAGACGTGACAGAGATTGTACGTGGGTTGTTACAATTTTGGAGTTGGATCACACTCATGAGTTGTCTGAAGAGAAGGTCAAATTCTTCAAGGAAAATCGACACTTGAGTATGCATGCAAAGCAAGTTATTGAAATAAATGATGAAGCAGGGGTAAGGCCAAATAAAACTTTTCAAACTCTTGTCCATGGAATTGGTGGTTACTCTGAATTGCCATCTATTGAGAAGGATGAGTATGAAGTAGTGTATGATTCTGTTTCAATTGACATTAAATGTCAATGTTTAATGTTTGAATCACGTGGTATTATGTGTCGCCATTCACTTTGTGTTATGGGGCAAGAATCTGTTGAAAAAGTGCCAGATAAATACATTTTGAAACGATGGAGCAAAAATGTACAACGTAAGCACTCAAATATAAAGTGTAGTCATGACTCAAGCCGCTCGGAGCCAAGCAAGATGCGATATAATGATCTGTGCTCACACTTTTACAATGTGGCTGAAGCATTTATTGATTCTGACGAGGCTGCTGGCATTATGCACCGTGCGTTGGATGCTGCGGTGGTTGAAATTGGTTCACATTTTGCTGAAAAACAATTTGAGGATTCTTCAGTTGACAACATGACACCTACTCCACTACATCCGCCTTCACAAGTTGATGTTGGTTCATTTACAACATTATTATATTCCTTTGCACCTACACAGCTACCAGTACCACACGACCCTCCAAGTGATGCTTAA 1089 0.3912 MDENSNGEISMEENVDLLDQIVSEKMLEVHNTCSIQKGEYPQMGMRFISDHDANFFYSNYAKKVGFSSRTRSSKKYVDGTVKQRTYTCGREGTRGSVAASLEKNKLISAANCKARMVVRRDRDCTWVVTILELDHTHELSEEKVKFFKENRHLSMHAKQVIEINDEAGVRPNKTFQTLVHGIGGYSELPSIEKDEYEVVYDSVSIDIKCQCLMFESRGIMCRHSLCVMGQESVEKVPDKYILKRWSKNVQRKHSNIKCSHDSSRSEPSKMRYNDLCSHFYNVAEAFIDSDEAAGIMHRALDAAVVEIGSHFAEKQFEDSSVDNMTPTPLHPPSQVDVGSFTTLLYSFAPTQLPVPHDPPSDA* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1371 362 ProSiteProfiles Zinc finger SWIM-type profile. 196 232 IPR007527 GO:0008270
Aev08g1371 362 Pfam FAR1 DNA-binding domain 56 140 IPR004330 -
Aev08g1371 362 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 11 149 - -
Aev08g1371 362 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 192 310 - -
Aev08g1371 362 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 11 149 IPR031052 GO:0006355
Aev08g1371 362 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 192 310 IPR031052 GO:0006355
Aev08g1371 362 SMART 26again6 207 234 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1371 Aev-Chr8 9045599 9048498 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev08g1371 FAR1 6.7e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1371 - - ahf:114926103 136.732