Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1367 ATGACCCAGCCGCCGTTGGCGCCACCGCCACCCCCACCCCCGCCGCCACCACAACCGGCGACTCCTCCGCCGCCCCAGCCCTCTGACAGCGTTCGGGTGCGCTGCGCCGGCTGCCGTATGATCCTAACCGTGGCCCCCGGCTTGACCGAGTTCGCTTGCCCTAGCTGCCGAATGCCGCAGATGCTTCCTCCTGAACTCATGGCTAGGGCCCACCAGGCGGCGCCCACTCCATCCCTGACGCCGTCACCGTTGCATCCGCCGCTGCCTCTTCCTCCTCCTCCGTCTTCACAGTCTCAGCCGCCGCACGTTCCCGCCCACGGCATTGATCCTACCAAGATCCAGCTTCCCTGCGCTTCCTGCAAGGCCATCCTCAACGTACCTCACGGCCTCTCGCGCTTCTCTTGCCCGCAATGTAGGGTTGACCTCGCCGTCGATGTTTCCAAGGTCAAGCAGTTCTTCCCTTCCGTGCAGCCTTCGATTCCTCCTGAAGAAGTCAATGAGGTAGCTGTTGAAGTGGAGCGGGATGAGGATGAAGGAGGCATGCTTGGAGAAACATTTACAGATTATCGACCGCCAAAAGTATCTATTGGACCTCAACATCCAGATCCTGTTGTGGAGACATCTTCCTTGTCCGCAGTGCAGCCACCTGAGCCTACATATAATCCAAAAATAAAAGATAGTTTGGAAAGTACAAAGGCTTTGTCATGCTTGCAAATTGAGACATTGGTCTATGCTTGCCAGAGACACCTTCAACACCTCCCAAATGGTGCTAGGGCAGGATTTTTTGTTGGAGATGGAGCTGGTATAGGTAAAGGTCGAACGATTGCAGGGCTAATATGGGAGAATTGGCACCACGGAAGGAGAAAAGCATTGTGGATTTCTGTTGGTTCAGACTTGAAGTTTGATGCCAGAAGAGACTTGGATGATGTGGAAGCAACATGCATTGATGTGCATGCTTTGAACAAACTGCCTTATTCTAAGCTTGATTCAAAGTCTGTTGGGATCAGGGAGGGAGTTGTTTTCTTGACATACAATAGTCTCATAGCATCTTCTGAGAAAGGTCGATCTCGTCTCCAACAGCTTGTGCAGTGGTGTGGACCTGGCTTTGATGGTCTTCTAATTTTTGATGAGTGTCACAAAGCAAAAAATTTGGTCCCGGAATCTGGTAGTCAGCCAACACGAACTGGAGAAGCAGTGCTTGAAATTCAGGATCGACTGCCTGAAGCCCGAGTTGTTTATTGCTCTGCTACTGGTGCATCTGAGCCTCGTAACATGGGTTATATGGTTAGACTCGGCCTTTGGGGAGATGGGACTTCTTTCTCTGATTTTCGTGAATTTCTAGGTGCTCTTGATAGAGGGGGTGTTGGAGCTCTAGAATTAGTTGCAATGGACATGAAAGCAAGGGGGATGTATTTATGTCGGACACTTAGCTACAAGGGTGCTGAGTTTGAAGTTATTGAAGCACCCCTAGAAGATGAAATGATGGATATGTATAAAAAGGCAGCAGAATTTTGGGCAGAGTTGCGAGTTGAATTGTTGTCAGCAAGTGCCTTTCTAAATGAAAAACCTAATTCTAGTCAGCTATGGAGATTATATTGGGCAAGCCACCAGCGTTTCTTTAGACACATGTGTATGTCTGCAAAAGTCCCTGCTACTGTGAGACTAGCAAAACAAGCTTTAAGTGAGGATAAGTGTGTAGTCGTTGGTCTTCAAAGTACAGGAGAAGCACGGACTGAGGAAGCTGTGACAAGATATGGTTCTGAACTTGATGACTTTGTTTCCGGACCTCGAGAATTGCTGCTTAAGTTTGTTGAAGAAAATTACCCATTACCTGAAAAACCTGAACTTCTTCCAGGGGAGGATGGTGTGAAGGAGCTCCAAAGGAAGAGGCACTTAGCAACTCCTGGAGTTTCAGTAAAAGGAAGGGTCAGAAAAGTAGCCAAGTGGCAGCCTCCTAGTGATCCTGAAAGTGATGAAGAATCTGAAACTGACTCGGTCATTGAATCTACGGACTCAGATGATGAGTTTCAGATATGTGAAATTTGCACAACCGAGGAGGAAAGGAAAAAGTTGCTACAGTGTTCCTGCTGTGGTAAATTAGTCCACCCAGCTTGCTTGATGCCACCAATTGGTGATATAGTACCTGAAGAGTGGTCATGCCATTTGTGCAAGGAAAAAACTGATGAATATCTTATAGCAAGACAAGCTTACATAGCTGAACTGCAGAAGAGGTATGATGCTGCTATGGAACGCAAGACAAAAATATTAGAGATCATCCGTTCTTTGGATCTTCCCAATAATCCTTTGGACGATATTATTGATCAGTTAGGAGGGCCTGATAAAGTTGCAGAAATGACAGGAAGGAGAGGCATGCTTGTGAGGGCTGCTACTGGGAAGGGTGTAACTTACCAGGCTCGTAATACAAAGGATGTGACTATGGAAATGGTTAACATGCACGAAAAGCAACTCTTTATGGACGGTAAGAAGTTAGTTGCTATTATCTCTGAAGCCGGATCAGCTGGCGTTTCTTTGCAGGCAGATAGAAGAGCCACAAATCAGAAAAGAAGGGTTCATTTAACTCTGGAACTTCCATGGAGTGCTGATCGAGCAATTCAGCAATTCGGAAGAACTCATCGATCAAACCAAGCTTCAGCCCCAGAATACAGGATACTCTTTACTAATCTTGGTGGAGAACGGAGATTTGCATCAATTGTTGCTAAGAGATTAGAATCTCTTGGTGCTTTGACCCAAGGGGACCGCAGGGCTGGACTTTCGTTAAGTGCTTATAACTATGATAGTGCTTATGGAAAGAGGGCTCTGGTGATTATGTACAAGGGAATAATGGAACAGGATTCCTTGCCTGTTGTACCTCCAGGATGTTCATCCGAAAGACCAGAAACTATTCAAGATTTTATTAATCAGGCAAAAGCTGCTCTTATATCTGTTGGAATAGTTAGGGACACAACTCTTGGCAACGGTAAAGAGCTTGGAAGGTTATCTGGTCGCATTATTGATTCAGATATGCATGATGTTGGACGATTTCTCAACCGGCTTTTGGGACTACCTCCTGAGATTCAAAATAAGCTGTTTGAGCTATTTGTTAGTATCTTGGATCTTCTTGTTCAAAATGCTCGCATTGAAGGTAACCTTGACACAGGCATTGTCGACTTGAAAGCTAATGTCATTGAACTACAAGGAACTCCAAAGACTGTTCATGTTGATCAAATGACTGGGGCTTCAACGGTTCTTTTTACATTCATCTTGGATCGAGGAATCACATGGGAGTCGGCAAGTAGCATGCTGAATGAAAAGCAGAAGGATAGGCTTGGTTCTGCCAATGATGGCTTTTATGAGTCCAAGAGGGAATGGTTGGGGAAACGTCATTTCATTTTAGCATTTGAAAGCTCTGCTTCGGGTATGTACAAAATAGTTCGCCCCGCTGTTGGAGAATCAATTCGGGAAATGCCTCTATCTGAATTAAAAAGTAAATATAGAAAAGTTTCATCCATAGAAAAGGCTCAAATTGGTTGGGAAGAGGAATATGAAGTTTCATCTAAACAGTGCATGCATGGTCCCAATTGTAAGATAGGCAACTTTTGTACAGTAGGCAAAAGATTGCAGGAAGTAAATGTTTTGGGTGGCCTCATTCTTCCTGTTTGGGGAACCATAGAAAAGGCCCTTTCTAAGCAGGCCCGCCTAAGCCATAGGAGACTACGTGTTGTACGAATAGAAACTACTACCATGGATAACCAGCGTATCGTCGGGCTTCTCGTTCCCAATGCAGCAGTTGAGTCTGTGCTTCAAGATTTGTCGTGGGTGCAAGAAATTGATGATTAA 3837 0.459 MTQPPLAPPPPPPPPPPQPATPPPPQPSDSVRVRCAGCRMILTVAPGLTEFACPSCRMPQMLPPELMARAHQAAPTPSLTPSPLHPPLPLPPPPSSQSQPPHVPAHGIDPTKIQLPCASCKAILNVPHGLSRFSCPQCRVDLAVDVSKVKQFFPSVQPSIPPEEVNEVAVEVERDEDEGGMLGETFTDYRPPKVSIGPQHPDPVVETSSLSAVQPPEPTYNPKIKDSLESTKALSCLQIETLVYACQRHLQHLPNGARAGFFVGDGAGIGKGRTIAGLIWENWHHGRRKALWISVGSDLKFDARRDLDDVEATCIDVHALNKLPYSKLDSKSVGIREGVVFLTYNSLIASSEKGRSRLQQLVQWCGPGFDGLLIFDECHKAKNLVPESGSQPTRTGEAVLEIQDRLPEARVVYCSATGASEPRNMGYMVRLGLWGDGTSFSDFREFLGALDRGGVGALELVAMDMKARGMYLCRTLSYKGAEFEVIEAPLEDEMMDMYKKAAEFWAELRVELLSASAFLNEKPNSSQLWRLYWASHQRFFRHMCMSAKVPATVRLAKQALSEDKCVVVGLQSTGEARTEEAVTRYGSELDDFVSGPRELLLKFVEENYPLPEKPELLPGEDGVKELQRKRHLATPGVSVKGRVRKVAKWQPPSDPESDEESETDSVIESTDSDDEFQICEICTTEEERKKLLQCSCCGKLVHPACLMPPIGDIVPEEWSCHLCKEKTDEYLIARQAYIAELQKRYDAAMERKTKILEIIRSLDLPNNPLDDIIDQLGGPDKVAEMTGRRGMLVRAATGKGVTYQARNTKDVTMEMVNMHEKQLFMDGKKLVAIISEAGSAGVSLQADRRATNQKRRVHLTLELPWSADRAIQQFGRTHRSNQASAPEYRILFTNLGGERRFASIVAKRLESLGALTQGDRRAGLSLSAYNYDSAYGKRALVIMYKGIMEQDSLPVVPPGCSSERPETIQDFINQAKAALISVGIVRDTTLGNGKELGRLSGRIIDSDMHDVGRFLNRLLGLPPEIQNKLFELFVSILDLLVQNARIEGNLDTGIVDLKANVIELQGTPKTVHVDQMTGASTVLFTFILDRGITWESASSMLNEKQKDRLGSANDGFYESKREWLGKRHFILAFESSASGMYKIVRPAVGESIREMPLSELKSKYRKVSSIEKAQIGWEEEYEVSSKQCMHGPNCKIGNFCTVGKRLQEVNVLGGLILPVWGTIEKALSKQARLSHRRLRVVRIETTTMDNQRIVGLLVPNAAVESVLQDLSWVQEIDD* 1279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1367 1278 Gene3D - 227 429 IPR027417 -
Aev08g1367 1278 SUPERFAMILY FYVE/PHD zinc finger 669 728 IPR011011 -
Aev08g1367 1278 MobiDBLite consensus disorder prediction 643 671 - -
Aev08g1367 1278 Pfam C-terminal domain on Strawberry notch homologue 767 1056 IPR026937 -
Aev08g1367 1278 ProSiteProfiles Zinc finger PHD-type profile. 676 726 IPR019787 -
Aev08g1367 1278 PANTHER OS08G0223700 PROTEIN 28 1278 - -
Aev08g1367 1278 MobiDBLite consensus disorder prediction 204 224 - -
Aev08g1367 1278 Pfam P-loop containing NTP hydrolase pore-1 199 499 IPR039187 -
Aev08g1367 1278 MobiDBLite consensus disorder prediction 79 100 - -
Aev08g1367 1278 SMART PHD_3 678 724 IPR001965 -
Aev08g1367 1278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 822 922 IPR027417 -
Aev08g1367 1278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 442 IPR027417 -
Aev08g1367 1278 Pfam PHD-finger 678 726 IPR019787 -
Aev08g1367 1278 PANTHER STRAWBERRY NOTCH-RELATED 28 1278 IPR026741 GO:0006355
Aev08g1367 1278 MobiDBLite consensus disorder prediction 1 31 - -
Aev08g1367 1278 MobiDBLite consensus disorder prediction 70 108 - -
Aev08g1367 1278 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 633 736 IPR013083 -
Aev08g1367 1278 MobiDBLite consensus disorder prediction 174 193 - -
Aev08g1367 1278 MobiDBLite consensus disorder prediction 656 671 - -
Aev08g1367 1278 Coils Coil 738 758 - -
Aev08g1367 1278 ProSitePatterns Zinc finger PHD-type signature. 679 723 IPR019786 -
Aev08g1367 1278 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1367 Aev-Chr8 8983986 9013412 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev08g1367 AAA_34 1.6e-132 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1367 - - gmx:100804594 2192.54