Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1361 ATGAGAAGCGGCACGGCTGGAGGAGAGAGAGAATGGGAAGGCTGGAAGCAGAATCGTTTCCAGCATAGTATCCATCAAAAACTCCATGAGAGAAGGAGAAGATTCTCACAAAACAGAGGAACGCCAAGGAGGTATGGACGTAAAGAGTTCACTCACAAGATCAACCAAACAAGATATGAAAGAGTCTCAATTTTTGTCGACAATATCCCATGGACAAGGAATAAGCGGTGGCTATGGGAGATCTTCAAAAATTATGGATGGGTACTAGATATTTTCATCTCCTTGAGGCGCAAACCAGGAAAGAACAAAACTTTTGGGTTTGTTAGATTCGGCACAATACAGGAAGCGGAACAGGCTGTTAACGGCACTGATCGATTAGAAATCGATGGAAGCATATTACTGACAAGGATTTCCCAAAATAGATACTCTAAGCAGGGCGACATCAAGAAAGTGTGGGTGAAGGTCAAGCAATCAGAAAACGCTCAGAAAAATCAAGTAATCAATAGTAGAAATGCAATCGGGGAGAACAAGAACATAGAAGAACACTCTATCATTAATGGAGTGGTCAATGAAGATGCTGTTAAATG 587 0.4174 MRSGTAGGEREWEGWKQNRFQHSIHQKLHERRRRFSQNRGTPRRYGRKEFTHKINQTRYERVSIFVDNIPWTRNKRWLWEIFKNYGWVLDIFISLRRKPGKNKTFGFVRFGTIQEAEQAVNGTDRLEIDGSILLTRISQNRYSKQGDIKKVWVKVKQSENAQKNQVINSRNAIGENKNIEEHSIINGVVNEDAVK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1361 195 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 64 131 IPR000504 GO:0003723
Aev08g1361 195 PANTHER RIBONUCLEIC ACID BINDING PROTEIN S1 38 152 - -
Aev08g1361 195 Gene3D - 9 164 IPR012677 -
Aev08g1361 195 CDD RRM_SF 64 133 - -
Aev08g1361 195 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 62 140 IPR000504 GO:0003723
Aev08g1361 195 SMART rrm1_1 63 136 IPR000504 GO:0003723
Aev08g1361 195 SUPERFAMILY RNA-binding domain, RBD 60 144 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1361 Aev-Chr8 8897165 8897751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1361 64 141 Eukaryotic Initiation Factors Gene Family AT3G16380 28.205 4.35e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1361 - K13126 csin:114272780 64.6994