Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1346 ATGTACAGACCAAACTCAGGAATATTTCATTCCCGAGAAAGTGATTCCCGGGGAAGTGATTCCCTAAGGATACTCTCGTTTTCGACACCTACGATGGCCGCTAATCTTGCTGCGTCCACGACGACGTTGTCTCAGGAGAAACGACGCCGTTCAATCTTTGAACTCTCACCGAGTTTCTTCGACTCTTGCCGCCTCCTTCCTTCTCCTCACTTTTCCTCTTACGATGCTCGTAATGCGCGCCACGAATTGCCCTCTAACGACGACGTCGTCGCCGACAACTCTCAAAACGCCGTCGTTTCAGAGGCTAGGTGGACTTGCAATACCTGCAAGGCTCAATTCAATTCACTTCAAGACCAGCGTTCCCATTTCAAATCCGACATTCATCGATTCAATGTGAAGCTCACAGTTGCTGGAAAGAATATTGTGAAGGAAGAAGATTTTGAGGTGCTTACATCTGAATTCGTCGAAAACTATGATGTGTCAAGTATATCAGGGTCAGAAAGTGATGATGACAGCGAAGCGGAGCATGTGAATCGCAATGAAGTGGGAGACAAATCGAGTGAAATTCTTAAACAAAAGCTGCTTGTTGGTCTTCAGACGGGGCAGAGAGTCTCTGTCTGGAAGTGCTTGATTATGAATGTGGCTGAGGATGTATTGTATGACGATGAAAATGCCCAGCGCGAAGTGGTTGATAGATTGAAGTCTCTTACACTTGAGCCCAGGGATAATTCCCATTTGAGAATTGTGCTGCTTGCATCTGGTGGGCACTTTGCTGGTTGTGTCTTTGATGGCGATAAAATTGTGGCTCACAAGACTTTTCATAGATACGTTGTGAGGGCCAAGGCAGGAAAGAAACAGTCGTCAAAAGATGCATCTGGCCGGGCTGCACATTCTGCTGGGGCTTCACTTCGTCGTCATAATGAACTTGCACTTAAGAAGGAAGTTCAAGAGCTGCTTACTTCTTGGAGAGCTTATTTCGAAGCTTCTAATTGCATTTTTATGTATGCACCTTCAAGTAGTCGCCAACTGTTTTATGATGGAGAAAAACCATACTTTTCCAACCAGCAGTGTGCTATTAGACATATTCCTTTAAGTACTCGGAGGCCTACTTTCAGGGAAGCAAAGCGTGTATATAGCCAGTTGACTCAGGTATCCTTTGAAGCAGATGAGAAGGAAATTTTACAAAGCAACCAAGAGGACTCAGTATCATTTCCTACTGATATAAGAAATATCAACCCACTGACCAGCAAAGGGAACTTGGCTGAGTTGGATAACAAAGATAAAGCTGAAGCTTGTTCAAGTAAACAAAGTGATGGATCCCCCATTTTGAGTGATGAAGAGAGTGAGAATGAGCTACCGGGTAGATCAACTCCTTTACATCAAGCTGCACAATCTGGTGACTCTCACAAGGTTATGGAACTCCTGGAACAGGGCTTGGATCCTTGCATTAAAGATGAGAGGGGACGAACCCCATATATGCTAGCACATGAGAAGGAAGTCAGGAATACATTCCGAAGGTTTATGGCTTCAAACCCCAACAAATGGGATTGGCATGCTGCAAAAGTACCTAGTGCATTGACCAAAGAAATGGAAGACTTACAAGCTGCAAAGAAGGTTGAGAAAGATGCTAAGAGAAAAGCCAGAGCAAAAGAATTAAAGAAATTGCGTAAAGCAAAAGAAAAGAAGGCTCAGGCTGAAGCTGCCTTGGTGAAGAATGGTTCAAAACAAGTGACTGCCCAAGCTTCTATCAAGGGACAATCAGAATCCAAAAGTGGTGTGCAATTATCTAATGAGGAGGAAATAAGAAGAGCGCAGGCTGAAGAGAGGGAAAAAAGAGCAGCGGCTGCCGAGAGAAGAATGGCTGCCCTCAAAATTCAAAATGATAGCGAAAACACCGCATCTAGCGGAGGATTAACCGGTGATACATACTGTTCCTGTTGTAATTCATCTCTTGCCGAGAGATGTCAACATCATGTTGACCGGACCGCCCAGTACTCTTCATGGATTAATGCTTTGGAAATATATGTTGATTTTGAAGAAATTGGTGACGAGAATGAAGTTGTTCATACTCAAGATATTTTAGAAAAGGAGATTGAATGGGAACAAAGTGATGATGATGACTACTACAATAATGATGAAGTTGGTGTTGAAAATCCAGTTAAAGAGTAA 2169 0.4352 MYRPNSGIFHSRESDSRGSDSLRILSFSTPTMAANLAASTTTLSQEKRRRSIFELSPSFFDSCRLLPSPHFSSYDARNARHELPSNDDVVADNSQNAVVSEARWTCNTCKAQFNSLQDQRSHFKSDIHRFNVKLTVAGKNIVKEEDFEVLTSEFVENYDVSSISGSESDDDSEAEHVNRNEVGDKSSEILKQKLLVGLQTGQRVSVWKCLIMNVAEDVLYDDENAQREVVDRLKSLTLEPRDNSHLRIVLLASGGHFAGCVFDGDKIVAHKTFHRYVVRAKAGKKQSSKDASGRAAHSAGASLRRHNELALKKEVQELLTSWRAYFEASNCIFMYAPSSSRQLFYDGEKPYFSNQQCAIRHIPLSTRRPTFREAKRVYSQLTQVSFEADEKEILQSNQEDSVSFPTDIRNINPLTSKGNLAELDNKDKAEACSSKQSDGSPILSDEESENELPGRSTPLHQAAQSGDSHKVMELLEQGLDPCIKDERGRTPYMLAHEKEVRNTFRRFMASNPNKWDWHAAKVPSALTKEMEDLQAAKKVEKDAKRKARAKELKKLRKAKEKKAQAEAALVKNGSKQVTAQASIKGQSESKSGVQLSNEEEIRRAQAEEREKRAAAAERRMAALKIQNDSENTASSGGLTGDTYCSCCNSSLAERCQHHVDRTAQYSSWINALEIYVDFEEIGDENEVVHTQDILEKEIEWEQSDDDDYYNNDEVGVENPVKE* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1346 722 ProSiteProfiles Ankyrin repeat profile. 454 486 IPR002110 GO:0005515
Aev08g1346 722 MobiDBLite consensus disorder prediction 396 419 - -
Aev08g1346 722 SUPERFAMILY beta-beta-alpha zinc fingers 103 136 IPR036236 -
Aev08g1346 722 ProSiteProfiles Ankyrin repeat region circular profile. 454 486 - -
Aev08g1346 722 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 44 655 - -
Aev08g1346 722 Coils Coil 530 568 - -
Aev08g1346 722 MobiDBLite consensus disorder prediction 573 609 - -
Aev08g1346 722 MobiDBLite consensus disorder prediction 573 594 - -
Aev08g1346 722 Pfam Bacteroidetes VLRF1 release factor 248 386 IPR041175 -
Aev08g1346 722 MobiDBLite consensus disorder prediction 396 467 - -
Aev08g1346 722 SUPERFAMILY Ankyrin repeat 456 510 IPR036770 -
Aev08g1346 722 Coils Coil 597 633 - -
Aev08g1346 722 MobiDBLite consensus disorder prediction 700 722 - -
Aev08g1346 722 Gene3D - 411 521 IPR036770 -
Aev08g1346 722 ProSitePatterns Zinc finger C2H2 type domain signature. 106 128 IPR013087 -
Aev08g1346 722 MobiDBLite consensus disorder prediction 595 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1346 Aev-Chr8 8737278 8752190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1346 47 629 C2H2 Transcription Factor Family AT1G01930 54.000 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1346 K26089 - gmx:100808912 820.076