Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1340 ATGAAAAGAATGAATAATGAGGTTGAAGATGAGGTGCTTTCCAATGATCAGACTGGGTCACAATTCAATGATGATGGTAGTGGAAGAAATACCAGTGGAGGTGTTCTGAAGAAAGGGCCATGGACATCTGCTGAAGATGCTATTTTAGTGGATTATGTGAATAAGTATGGGGAGGGGAACTGGAATGCTGTGCAGAAGCACTCAGGCTTGTTACGTTGCGGAAAAAGTTGCCGTCTTCGGTGGGCTAATCACCTGAGGCCAAATTTAAAGAAAGGAGCATTTACTGCAGAAGAGGAACGGTTGATTGCTGAACTTCACGTAAAAATGGGAAACAAATGGGCACGCATGGCAGCACACTTGCCTGGTCGTACAGATAATGAAATAAAGAATTACTGGAACACCCGGATCAAGAGGCGTCAACGGGCAGGCTTGCCACTTTATCCTCCTGAAGTGTGCATGCAAGCATTGCAAGAGAGTAAGCATGGTCAAAGCAATGATGGAATTAATGGTGGCAATAAAGTGCATCCTGATTTCTTGCAGAAAGACAGTTATGAGATGCATGGTGCAATATTTGACAGTCTGAAGGATAATCAGAGAATCTTACCTTATGTGCCTGAGCTTCCTGATATTTTTGCTTATAGCAATGTGCTGAAAGGTTTTGATTCTTCTCAGTATTGTAATTTTGTGCAATCAACATCACCTAACCATAAGCGTCTTCGAGGGTCAACAACATTTTTTATTGGATCCTGTGGCATGGACAGAAATGGGTTTTACCCATTTGACCATATTGGGAATAATACATCTCACAAGATTGAACAATCATTAGCGATGCAATCTTCCCTTGAATTTGATCCCTCCTCACACAGCTCAATTTGTTACAGTCATTCACTTTCGAATGGCAATTCCTCTGCTTCAAAGCCATCATCTGAGGCTGTGAAGTTGGAGCTCCCTTCACTCCAATATCCAGAAATTGAATTAGGTAGCTGGATTACAACTCCACCACCTCCTTTGCTTGAGTCAGTTGATGATTTCATTCAATCTCCAACTCCAATTAGTGCACTGGAGTCAGATTGTTCTACCCCACAAAATAGTGGCTTGCTGGATGCTTTACTTTATCAGGCAAAGGCTCTGAGCAATTCAAGGAACCATTATTCTGACAAGAGTTCAAATTCATCAACTGCAACTCCTGGTGACAGAGCGGCCAGCTCTACTTCGAACAAGTATGAGACAGATTGGGAAGGCTATGCTGGTCCTCTATCTCCATTTGGTGCTACTTCAATTTTAAACGAGTGCCATGCTGCTAGTGCTAGTGCAAATTCATTGGAAGAGCGGAAGACCGTTCAGTCCTTTAATGGGAACATTGTGAAAATGGAGTCTGTTGACCAGGTTTGGACCCCTAACAGTGAAAATCAAACCATGTCCAAGATAAAATTTACTCGGCCAGACTTCTTGGTTGCTGATGATTGGCTTGAGCAGGATTCAGGGCATGGCAATGGCATCATCTCTGATGATATATCAACCCTTCTTGGTGATGGTTCAACCGCTGACTACGATCATACACCCGCTGGAACTTCTCAGTCGAGTCAGCCATGGGTGTTAGGTTCTTGTGCAAGGGACGACATGCTTGCTTTCCGTCAAGTATCTAATCTTGGTTAA 1656 0.4318 MKRMNNEVEDEVLSNDQTGSQFNDDGSGRNTSGGVLKKGPWTSAEDAILVDYVNKYGEGNWNAVQKHSGLLRCGKSCRLRWANHLRPNLKKGAFTAEEERLIAELHVKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVCMQALQESKHGQSNDGINGGNKVHPDFLQKDSYEMHGAIFDSLKDNQRILPYVPELPDIFAYSNVLKGFDSSQYCNFVQSTSPNHKRLRGSTTFFIGSCGMDRNGFYPFDHIGNNTSHKIEQSLAMQSSLEFDPSSHSSICYSHSLSNGNSSASKPSSEAVKLELPSLQYPEIELGSWITTPPPPLLESVDDFIQSPTPISALESDCSTPQNSGLLDALLYQAKALSNSRNHYSDKSSNSSTATPGDRAASSTSNKYETDWEGYAGPLSPFGATSILNECHAASASANSLEERKTVQSFNGNIVKMESVDQVWTPNSENQTMSKIKFTRPDFLVADDWLEQDSGHGNGIISDDISTLLGDGSTADYDHTPAGTSQSSQPWVLGSCARDDMLAFRQVSNLG* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1340 551 CDD SANT 40 85 IPR001005 -
Aev08g1340 551 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 85 IPR017930 -
Aev08g1340 551 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Aev08g1340 551 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 140 IPR017930 -
Aev08g1340 551 MobiDBLite consensus disorder prediction 381 406 - -
Aev08g1340 551 CDD SANT 93 134 IPR001005 -
Aev08g1340 551 Gene3D - 37 90 - -
Aev08g1340 551 MobiDBLite consensus disorder prediction 1 38 - -
Aev08g1340 551 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 1 544 - -
Aev08g1340 551 MobiDBLite consensus disorder prediction 11 30 - -
Aev08g1340 551 Gene3D - 93 139 - -
Aev08g1340 551 Pfam Myb-like DNA-binding domain 38 85 IPR001005 -
Aev08g1340 551 Pfam Myb-like DNA-binding domain 91 134 IPR001005 -
Aev08g1340 551 SMART sant 37 87 IPR001005 -
Aev08g1340 551 SMART sant 90 138 IPR001005 -
Aev08g1340 551 SUPERFAMILY Homeodomain-like 37 132 IPR009057 -
Aev08g1340 551 ProSiteProfiles Myb-like domain profile. 36 85 IPR001005 -
Aev08g1340 551 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 1 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1340 Aev-Chr8 8681103 8684142 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1340 35 541 MYB Transcription Factor Family AT3G11440 42.617 7.38e-116 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev08g1340 Myb_DNA-binding 9.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1340 K09422 - gmx:100810415 729.554