Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1338 ATGGAAGCTGGGTCCTTAGATTCCGTTGATAAGTCAAGGATTGTAGATGCTAAGCCTCTTCGTAGTTTAGCCCCTTTGTTTCCAGAGTCTTCTAGAGCTTCTTCCTCTCGCCGGTACCCATTAGGGTTTTCTCCATTTTTACCATTTGGTGAGCCTCATGAATCTCCAGCACCAGCACCAGCACCTGCTCCAGCACCAGCAGCACCAGCACCAGCACCAGCTCCAGCTCCAAATCCTATACCAGCTCCAACTCCACTAAGGTCCTTTAGGCCCCCACTAGTTGAAGAATCAAGCACTTATAGAGCCGCTGGAGGAGCTTCTTCATCAATGGAGGGGCACAATGGTGTTCCCAATGAGCAAAAGAGTGCAGAACCGAATATGAGCAGTTGCAAATCATCGCAAAAGAGGAACAAGGCAATGAGTCAAGTGAAGAAATATGATTTGGGTTACTTGGTTGGTATTAGCCTAGACAAGAAGGATGATGGTGACCGCGACACGGTTAATGTTGTGCTGATGACATTCGATTCACTTCGAAGAAGGCTCTGCCAACTGGAAGATGCAAAGGAATTGAACACTAACGGTGTTATCAAGCGTGCGGATTTGAGAGCTAGCAATGCTATGACACTCAAAGGGGTTCGGACAAACTTGAGGAAGAGATTGGGAGCAGTGCCTGGGGTCGAGATTGGTGACATTTTCTTCTTGCGGATGGAATTAGTACTTGTGGGTTTACATGGCCAGACTATGGGCGGAATTGACTACATGACTGTTAAGGATGAACTTCATGAGGAACCTTTGGCTTTAAGCATTGTTTCATCTGGAGAGTATGATGATGATGCAGAGGATGATGATGTTTTGGTGTATAGTGGTCAGGGTGATTATCACAAGAAAGATAAGCATGTGACTGATCAGAAGCTTCAAAGGGGTAATCTTGCTCTGGATAGAAGTTCCCAACGACACAATGAAGTAAGACTCATCCGGGGTTTGAGAGACGCTGCTAATAAGAATGTGAAGATATATGTCTATGATGGTTTGTATAGTATCCAGGACTCATGGATAGAAAGGGGGAAATCCGGTGGCGGCGTGTTTAAGTATAAGTTTGTGAGATTGCCTGGACAGCCCAGTGCTTTTGCTGTTTGGAAACTGGCTCAAAAGTGGAAGGCAGGCTCCACTTCAAGGAATGGCCTTATTCTTGCAGATATCTCCTCAAGAGCTGAGAGCATTCCTGTATCACTTGTCAATGATGTTGATGATGAGAAGGGTCCTGCTTTTTTCACTTATGCACAATCTCTTAGGCATCCGAAGCCTTATGGTTCAGCGGTGCCTTCGTATGGGTGCAACTGTAACAAAGCATGTGTCCCGGACGATCTGAGTTGCTCTTGCATTCAAAGAAATGGAGGTGATTTTCCATATACTTCAAATGGTGTTCTTGTGAGTTCAAATGGCATTCTGGTGAGTCGAAAACAATTAATTCATGAATGTGGCCCAATGTGTCATTGCCTTCCTAGCTGCAAAAATCGAGTATCCCAGGGTGGTTTGAAGCACTACATGGAAGTGTTCAAAACAAAGGATAGAGGGTGGGGTCTTCGATCACTGGATCCCATTCGTGCAGGTACTTTCATTTGTGAGTATGCTGGAGAAGTTGTTGACAGTGCCAATGTAAGTCTTATTGGAAAGGATAGAGATGATGATGAGTACATTTTTGATACTAGCCGTACTTATGAACCATTCAAGTGGAATTATGAACCTAGCATACTGGAAGAAGGGATTTCAAGTGACTGTACTAGTGAGGATTATGCTATACAACCTCCTCTAATTATCAGTGCCAAAAATGTTGGAAATGTGGCTAGGTTCATGAATCATAGTTGCTCCCCAAATGTTTTCTGGCAGCCAGTTTTATATCAAGAGAATAATCAGTCCTTCCTTCACATTGCTTTTTATGCTCTTAGACACATTCCCCCATTGACAGAGTTAACATATGATTATGGAATTGTCCGTTCTGGTCATGCTGCTTTTACCGGTGATCCCAAAGGAAGAAAGAAATGCTTGTGTGGATCATCGAAATGCCGTGGTTCTTTCAGTTGA 2082 0.4409 MEAGSLDSVDKSRIVDAKPLRSLAPLFPESSRASSSRRYPLGFSPFLPFGEPHESPAPAPAPAPAPAAPAPAPAPAPNPIPAPTPLRSFRPPLVEESSTYRAAGGASSSMEGHNGVPNEQKSAEPNMSSCKSSQKRNKAMSQVKKYDLGYLVGISLDKKDDGDRDTVNVVLMTFDSLRRRLCQLEDAKELNTNGVIKRADLRASNAMTLKGVRTNLRKRLGAVPGVEIGDIFFLRMELVLVGLHGQTMGGIDYMTVKDELHEEPLALSIVSSGEYDDDAEDDDVLVYSGQGDYHKKDKHVTDQKLQRGNLALDRSSQRHNEVRLIRGLRDAANKNVKIYVYDGLYSIQDSWIERGKSGGGVFKYKFVRLPGQPSAFAVWKLAQKWKAGSTSRNGLILADISSRAESIPVSLVNDVDDEKGPAFFTYAQSLRHPKPYGSAVPSYGCNCNKACVPDDLSCSCIQRNGGDFPYTSNGVLVSSNGILVSRKQLIHECGPMCHCLPSCKNRVSQGGLKHYMEVFKTKDRGWGLRSLDPIRAGTFICEYAGEVVDSANVSLIGKDRDDDEYIFDTSRTYEPFKWNYEPSILEEGISSDCTSEDYAIQPPLIISAKNVGNVARFMNHSCSPNVFWQPVLYQENNQSFLHIAFYALRHIPPLTELTYDYGIVRSGHAAFTGDPKGRKKCLCGSSKCRGSFS* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1338 693 Pfam SAD/SRA domain 220 372 IPR003105 -
Aev08g1338 693 ProSiteProfiles Post-SET domain profile. 677 693 IPR003616 -
Aev08g1338 693 SMART set_7 514 668 IPR001214 GO:0005515
Aev08g1338 693 MobiDBLite consensus disorder prediction 1 138 - -
Aev08g1338 693 ProSiteProfiles SET domain profile. 514 662 IPR001214 GO:0005515
Aev08g1338 693 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 693 IPR025794 GO:0016571
Aev08g1338 693 Pfam Pre-SET motif 400 506 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aev08g1338 693 SMART G9a_1 216 372 IPR003105 -
Aev08g1338 693 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1 8 692 - -
Aev08g1338 693 Gene3D - 220 378 IPR036987 -
Aev08g1338 693 ProSiteProfiles Pre-SET domain profile. 443 511 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aev08g1338 693 MobiDBLite consensus disorder prediction 101 138 - -
Aev08g1338 693 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 8 692 - -
Aev08g1338 693 SUPERFAMILY SET domain 406 690 IPR046341 -
Aev08g1338 693 ProSiteProfiles YDG domain profile. 221 368 IPR003105 -
Aev08g1338 693 SUPERFAMILY PUA domain-like 203 390 IPR015947 -
Aev08g1338 693 MobiDBLite consensus disorder prediction 51 88 - -
Aev08g1338 693 Pfam SET domain 525 662 IPR001214 GO:0005515
Aev08g1338 693 SMART preset_2 397 498 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aev08g1338 693 Gene3D SET domain 389 692 IPR046341 -
Aev08g1338 693 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1338 Aev-Chr8 8644393 8646474 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1338 10 692 Su(var)3-9 homologs AT1G73100 49.636 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aev08g1338 SAD_SRA 1e-44 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1338 K24405 - gmx:100800651 951.044