Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1335 ATGCAATCCACAAAAGCTTACGGCAAAGTCGATGAAGTTGAGGATGCCATAATCGAAGCTCGCGGGAAAACCCGAAAGCGAATAGCCATAATAAGCCTGTCCACATTAGTTCTTGTTGGCATTGTGTGTGCTGCTGTGGTTGGAACAACTGTGGTTGGTCGCAACCACAGCAGCTCAGACAACAATGCCAACAACAACAACGCTCTTTCCACCAATTCAGTGGTGAAGGCTGTTTGTGACGTGACATTGTACAAGGAGGCATGCTATGGTAGCCTTGGTCCTCTTGTGCAGTCAGGCCAGCATCTTCAAGCAGAGGAGCTTTTTGTGTTGTCAGTGAAAGTGGCCTTATCTGAGGTTTCAAGAGCTGTTCAACATTTCTTCTCTGGTGATGGTGCTTTTTTTAAGGGCTTGAATGATGGCAGCAGGGTCAAGGAAGCTTTGAAGAATTGCCAGGATCTTTTGGGTCTTGCGGCTGATCATCTTAATAGCTCTTTGCTTTTGTCTTCTCATCGGGAACGGTCTTCTTCCTTACTTGATGTTGTGGAGGATCTTAGAACTTGGTTGAGTGCTGCAGGCACTTACCAGCAAACATGCATCGATGGCTTGGAGGAGGAAAATGAATTAGCATTGAAGACAAAGGTTGTGAGCTACCTCAAAAACTCCACAGAGTTCTCGAGTAACAGCCTTGCCATCATTACATGGATTAACAAGGCTGCAAGCACGTTGAACTTGAGGCGCTTGTTGAGTTCGCCTTCTCAGAATTCAGAACCAAAATGGGTGCCTTCGGACAGGAAACTACTTGAGAGCGATCAGTTGAAGAAGAAAGCCGACATGGTGGTCGCGAAAGACGGAAGCGGGAAATACAAAACAATCAGTGCGGCGCTCAGACACGTGCCTGACAAAAGTGAGAAGAGGACAGTTATCTATGTGAAGAAAGGGGTGTACTATGAGAATGTGAAGGTGGAGAAGACCAAATGGAATGTCATCATCATTGGTGATGGTATGAATGCCACTCTTGTCTCTGCCAGCCTTAACTTTGTTGATGGCACCCCCACATTTTCATCAGCAACATTTGCTGTATTTGGGAAGAATTTCATTGCTAGGGACATGGGATTTCGCAACACAGCAGGTCCACAGAAGCACCAGGCAGTGGCACTAATGACAAGTGCAGACCAAGCAGTTTACTATAGGTGTCAAATTGATGCATTTCAGGACACTCTATATGCTCATTCCAATCGCCAATTCTACAGAGAATGCAACATCTTAGGCACAGTTGACTTCATTTTCGGCAACTCCGCAGTTGTAATCCAAAACTGCAAAATCATGCCAAAGTTTCCTATGCAGGGCCAACAGAACACAATCACAGCACAGGGCAAAACAGACCCTAACATGAACACAGGGATTTCAATCCAGAATTGCACCATTTCACCATTTGGAAACTTGGGTTCTGTCCAAACATACCTTGGCAGGCCCTGGAAGAATTACTCCACCACAGTGTTCATGCAATCCATGATGGGAAGTCTCATCAACCCAAATGGATGGCTACCATGGGTAGGCAACTCTGCACCAGATACCATATTTTATGCAGAGTTTGAGAATTATGGGCCAGGTTCTTCAACCAAAAATAGGGTCAAATGGAAGGGTTTCAGAACCATTACAAGTAAACAAGCTAGATTGTTCACAGTGAAGCCATTTCTTTCAGGGGATAGATGGATTCCAGCTTCTGGTGCCCCCTTTAAATCATCTATATGA 1752 0.4526 MQSTKAYGKVDEVEDAIIEARGKTRKRIAIISLSTLVLVGIVCAAVVGTTVVGRNHSSSDNNANNNNALSTNSVVKAVCDVTLYKEACYGSLGPLVQSGQHLQAEELFVLSVKVALSEVSRAVQHFFSGDGAFFKGLNDGSRVKEALKNCQDLLGLAADHLNSSLLLSSHRERSSSLLDVVEDLRTWLSAAGTYQQTCIDGLEEENELALKTKVVSYLKNSTEFSSNSLAIITWINKAASTLNLRRLLSSPSQNSEPKWVPSDRKLLESDQLKKKADMVVAKDGSGKYKTISAALRHVPDKSEKRTVIYVKKGVYYENVKVEKTKWNVIIIGDGMNATLVSASLNFVDGTPTFSSATFAVFGKNFIARDMGFRNTAGPQKHQAVALMTSADQAVYYRCQIDAFQDTLYAHSNRQFYRECNILGTVDFIFGNSAVVIQNCKIMPKFPMQGQQNTITAQGKTDPNMNTGISIQNCTISPFGNLGSVQTYLGRPWKNYSTTVFMQSMMGSLINPNGWLPWVGNSAPDTIFYAEFENYGPGSSTKNRVKWKGFRTITSKQARLFTVKPFLSGDRWIPASGAPFKSSI* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1335 583 TIGRFAM PME_inhib: pectinesterase inhibitor domain 68 235 IPR006501 GO:0004857
Aev08g1335 583 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 73 235 IPR035513 -
Aev08g1335 583 CDD PMEI-like_3 77 237 - -
Aev08g1335 583 Pfam Plant invertase/pectin methylesterase inhibitor 74 231 IPR006501 GO:0004857
Aev08g1335 583 Gene3D Invertase/pectin methylesterase inhibitor family protein 71 236 IPR035513 -
Aev08g1335 583 ProSitePatterns Pectinesterase signature 2. 421 430 IPR033131 -
Aev08g1335 583 SUPERFAMILY Pectin lyase-like 275 579 IPR011050 -
Aev08g1335 583 PANTHER PECTINESTERASE 5 581 - -
Aev08g1335 583 Pfam Pectinesterase 277 569 IPR000070 GO:0030599|GO:0042545
Aev08g1335 583 Gene3D - 272 583 IPR012334 -
Aev08g1335 583 PANTHER PECTINESTERASE 5 581 - -
Aev08g1335 583 SMART PMEI_2 70 231 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1335 Aev-Chr8 8627983 8630600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1335 7 583 Carbohydrate Esterase AT3G10710 56.401 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1335 - - gmx:100816529 845.884