Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1319 ATGGCAGAGATGAGTGAAGAGGTTAAGGCAATTGTTCCAGAGTCTGTGCTGAAGAAGAGGAAGAGAGAGGAGGAGTGGGCTTTGGCCAAGAAGCAGGGGCTTGATGCTGCCAAGAAGAAGAGAGCCGAGAGCCGTAAGCTCATCTACAACAGGGCTAAGCAGTATTCCAAGGAGTACCAGGAGCAGGAAAGGGAACTGATCCAGTTGAAGCGTGAGGCAAAGCTAAAGGGTGGATTTTATGTTGATCCTGAGGCTAAGCTCTTGTTTATTATCCGCATTCGTGGTATTAATGCCATGCACCCCAAGACAAGGAAGATCTTGCAGCTGTTGCGATTGAGACAGATCTTCAATGGTGTGTTCCTTAAGGTTAACAAGGCTACAATAAACATGCTTCATAGAGTTGAGCCCTATGTGACTTATGATACCCAAATCTTAAGAGTGTCAAAGAACTCATCTACAAGAGGGGTTATGGCATTGGGCAAGTTTGGAATCATCTCCATTGAAGATCTTATCCATGAGATCATTACTGTTGGACCCCATTTTAAGGAAGCAAACAACTTCCTTTGGCCTTTTAAGCTGAAGGCTCCATTGGGTGGCTTAAAGAAAAAACAGGAACCACTATGTCGAAGGAGGGATGCTGGAAACAGGGAGAACTACATCAATCAGCTAATCAGGAGAATGAATTAG 687 0.4469 MAEMSEEVKAIVPESVLKKRKREEEWALAKKQGLDAAKKKRAESRKLIYNRAKQYSKEYQEQERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATINMLHRVEPYVTYDTQILRVSKNSSTRGVMALGKFGIISIEDLIHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKQEPLCRRRDAGNRENYINQLIRRMN* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1319 228 Pfam Ribosomal L30 N-terminal domain 12 83 IPR012988 -
Aev08g1319 228 Pfam Ribosomal protein L30p/L7e 88 138 IPR016082 -
Aev08g1319 228 Coils Coil 45 76 - -
Aev08g1319 228 ProSitePatterns Ribosomal protein L30 signature. 106 138 IPR018038 -
Aev08g1319 228 Gene3D - 87 228 IPR036919 -
Aev08g1319 228 CDD Ribosomal_L7_archeal_euk 87 228 IPR035808 -
Aev08g1319 228 PANTHER 60S RIBOSOMAL PROTEIN L7 147 228 IPR039699 -
Aev08g1319 228 PANTHER 60S RIBOSOMAL PROTEIN L7 147 228 - -
Aev08g1319 228 PANTHER 60S RIBOSOMAL PROTEIN L7 9 147 - -
Aev08g1319 228 PANTHER 60S RIBOSOMAL PROTEIN L7 9 147 IPR039699 -
Aev08g1319 228 SUPERFAMILY Ribosomal protein L30p/L7e 87 228 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1319 Aev-Chr8 8461395 8464474 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1319 4 228 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 72.541 2.65e-120 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1319 K02937 - gmx:100305682 334.724