Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1318 ATGGCAGAGATGAGTGAAGAGGTTAAGGCAATTGTTCCAGAGTCTGTGCTGAAGAAGAGGAAGAGAGAGGAGGAGTGGGCTTTGGCCAAGAAGCAGGGGCTTGATGCTGCCAAGAAGAAGAGAGCCGAGAGCCGTAAGCTCATCTACAACAGGGCTAAGCAGTATTCCAAGGAGTACCAGGAGCAGGAAAGGGAACTGATCCAGTTGAAGCGTGAGGCAAAGCTAAAGGGTGGATTTTATGTTGATCCTGAGGCTAAGCTCTTGTTTATTATCCGCATTCGTGGTATTAATGCCATGCACCCCAAGACAAGGAAGATCTTGCAGCTGTTGCGATTGAGACAGATCTTCAATGGTGTGTTCCTTAAGGTTAACAAGGCTACAATAAACATGCTTCATAGAGTTGAGCCCTATGTGACTTATGGATACCCAAATCTTAAGAGTGTCAAAGAACTCATCTACAAGAGGGGTTATGGTAAGCTGGACAAGCAGAGAATTGCCCTCACTGACAACTCCATTATTGAGCAG 525 0.461 MAEMSEEVKAIVPESVLKKRKREEEWALAKKQGLDAAKKKRAESRKLIYNRAKQYSKEYQEQERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATINMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLDKQRIALTDNSIIEQ 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1318 175 Pfam Ribosomal L30 N-terminal domain 12 83 IPR012988 -
Aev08g1318 175 PANTHER 60S RIBOSOMAL PROTEIN L7 9 175 IPR039699 -
Aev08g1318 175 Coils Coil 45 76 - -
Aev08g1318 175 ProSitePatterns Ribosomal protein L30 signature. 106 138 IPR018038 -
Aev08g1318 175 Gene3D - 87 174 IPR036919 -
Aev08g1318 175 SUPERFAMILY Ribosomal protein L30p/L7e 87 174 IPR036919 -
Aev08g1318 175 Pfam Ribosomal protein L30p/L7e 88 138 IPR016082 -
Aev08g1318 175 CDD Ribosomal_L7_archeal_euk 87 175 IPR035808 -
Aev08g1318 175 PANTHER 60S RIBOSOMAL PROTEIN L7 9 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1318 Aev-Chr8 8339109 8341819 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1318 4 175 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 87.283 4.04e-105 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1318 K02937 - gmx:100305682 303.523