Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev08g1318 | ATGGCAGAGATGAGTGAAGAGGTTAAGGCAATTGTTCCAGAGTCTGTGCTGAAGAAGAGGAAGAGAGAGGAGGAGTGGGCTTTGGCCAAGAAGCAGGGGCTTGATGCTGCCAAGAAGAAGAGAGCCGAGAGCCGTAAGCTCATCTACAACAGGGCTAAGCAGTATTCCAAGGAGTACCAGGAGCAGGAAAGGGAACTGATCCAGTTGAAGCGTGAGGCAAAGCTAAAGGGTGGATTTTATGTTGATCCTGAGGCTAAGCTCTTGTTTATTATCCGCATTCGTGGTATTAATGCCATGCACCCCAAGACAAGGAAGATCTTGCAGCTGTTGCGATTGAGACAGATCTTCAATGGTGTGTTCCTTAAGGTTAACAAGGCTACAATAAACATGCTTCATAGAGTTGAGCCCTATGTGACTTATGGATACCCAAATCTTAAGAGTGTCAAAGAACTCATCTACAAGAGGGGTTATGGTAAGCTGGACAAGCAGAGAATTGCCCTCACTGACAACTCCATTATTGAGCAG | 525 | 0.461 | MAEMSEEVKAIVPESVLKKRKREEEWALAKKQGLDAAKKKRAESRKLIYNRAKQYSKEYQEQERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATINMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLDKQRIALTDNSIIEQ | 175 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev08g1318 | 175 | Pfam | Ribosomal L30 N-terminal domain | 12 | 83 | IPR012988 | - | |
Aev08g1318 | 175 | PANTHER | 60S RIBOSOMAL PROTEIN L7 | 9 | 175 | IPR039699 | - | |
Aev08g1318 | 175 | Coils | Coil | 45 | 76 | - | - | |
Aev08g1318 | 175 | ProSitePatterns | Ribosomal protein L30 signature. | 106 | 138 | IPR018038 | - | |
Aev08g1318 | 175 | Gene3D | - | 87 | 174 | IPR036919 | - | |
Aev08g1318 | 175 | SUPERFAMILY | Ribosomal protein L30p/L7e | 87 | 174 | IPR036919 | - | |
Aev08g1318 | 175 | Pfam | Ribosomal protein L30p/L7e | 88 | 138 | IPR016082 | - | |
Aev08g1318 | 175 | CDD | Ribosomal_L7_archeal_euk | 87 | 175 | IPR035808 | - | |
Aev08g1318 | 175 | PANTHER | 60S RIBOSOMAL PROTEIN L7 | 9 | 175 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev08g1318 | Aev-Chr8 | 8339109 | 8341819 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev08g1318 | 4 | 175 | Cytoplasmic Ribosomal Protein Gene Family | AT3G13580 | 87.283 | 4.04e-105 | 299 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev08g1318 | K02937 | - | gmx:100305682 | 303.523 |