Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1316 ATGATTATCTTCAATGGTGTGTTCCTTAAGGTTAACAAGGCTACAATAAACATGCTTCATAGAGTTGAGCCCTATGTGACTTATGGATACCCAAATCTTAAGAGTGTCAAAGAACTCATCTACAAGAGGGGTTATGGTAAGCTGGACAAGCAGAGAATTGCCCTCACTGACAACTCCATTATTGAGCAGGCATTGGGCAAGTTTGGAATCATCTCCATTGAAGATCTTATCCATGAGATCATTACTGTTGGACCCCATTTTAAGGAAGCAAACAACTTCCTTTGGCCTTTTAAGCTGAAGGCTCCATTGGGTGGCTTAAAGAAAAACAGGAACCACTATGTCGAAGGAGGGGATGCTGGAAACAGGGAGAACTACATCAATCAGCTAATCAGGAGAATGAATTAG 405 0.4148 MIIFNGVFLKVNKATINMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLDKQRIALTDNSIIEQALGKFGIISIEDLIHEIITVGPHFKEANNFLWPFKLKAPLGGLKKNRNHYVEGGDAGNRENYINQLIRRMN* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1316 134 SUPERFAMILY Ribosomal protein L30p/L7e 3 134 IPR036919 -
Aev08g1316 134 Gene3D - 2 78 IPR036919 -
Aev08g1316 134 Gene3D - 79 134 IPR036919 -
Aev08g1316 134 PANTHER 60S RIBOSOMAL PROTEIN L7-RELATED 3 134 - -
Aev08g1316 134 PANTHER 60S RIBOSOMAL PROTEIN L7 3 134 IPR039699 -
Aev08g1316 134 CDD Ribosomal_L7_archeal_euk 3 134 IPR035808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1316 Aev-Chr8 8333785 8334593 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1316 3 134 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 88.636 1.07e-86 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1316 K02937 - tcc:18590033 256.914