Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1307 ATGCACGGGGCCCACTCATCCATTCGTGACCGTACCCATGAATTCCACAGCATCGCCGACAGGTTGAAGAAATCCTCTTCTGGCCTTAACGGGCCCACCACCACCAGTACCGCTTCTTCTTCTTCGAGATCGGAGGAACAGCGATCCAACATTGCACTTCAGTCAGAGTTCAATCGCAGGGCTTCCAAGATTGGCTATGGAATCCACCAAACCTCCCAGAAGCTCGCCAAGCTCGCTAAGCTGGCGAAGAGGACTTCGGTGTTTGATGATCCTACCATGGAAATCCAAGAGCTTACGGGTGTTATAAAGCAAGACATTACTGCGCTGAACTCTGCGGTTGTGGATCTTCAGTTGCTCTCCAACTCCAGAAACGAGAATGGAAGTGTTTCTACGGACACCACAAGCCATTCGACTACGGTTGTGGATGATCTCAAGACTCGTTTGATGAGCACCACCAAAGAGTTCAAAGATGTTCTCACCATGAGAACTGAGAACTTGAAAGTGCATGAGAATAGAAGACAATTGTTTTCTTCTACTGCTTCCAAGGATTCTGCAAATCCTTTTGTTCGTCAACGGCCATTGGCTACAAGGTCGGCTGCTGCTGGTGCATCTAATGCCCCTGCGCCCCCGTGGGCTAGTGGCTCGCAGTCTGCCTCTCAGGCTATTCCTAAGAAGCAGGTGGATGGAGAGAGTCAACCCTTACTGTCACAACAGCAACAGCAGCAGCAGCAGATGGTTCCATTGCAAGACAGTTACATGCAAAGCAGAGCTGAAGCTCTTCAGAACGTTGAATCCACTATTCATGAGCTCAGCAGCATCTTTAATCAACTAGCAACCCTTGTTTCCCAACAGGGAGAAGTTGCCATCAGGATTGATGAAAATATGGATGATACATTGGCAAACGTAGAGGGGGCACAAGGGGCTCTGTTGAAGTACCTGAACAGCATATCCTCTAATAGCCAATTCCAACGACAGAGAAATGAAAATGACGGCGTTCTTCTTAGTCTTACTGGTGATAAGCCAGCTTTGTGTCTCGAATGCCCCGCCACTGCTGAATTCGTTCTAGGGACTGAGAAGAGAAACTTCTTGGTCCCTCGCGTTAGAAGAAGGAACTTCCCCAAAAGGGGTCTTCGTAGGTGCTCTGTATCTGCAAAAAAACAGGGTGACCCGGTAAGCCAATCTCTCAGGTTTCCTCAATTTTGTGTCCAAAATGTGAACTTTTTGAGGAGGAACCTCGTTTCCACTAGTGGGTCGAGGTTGAATTGCACTAGGGAACCCTTTTATAAGAACAAGGCTTTGGTTAGTTATTTGAACCCTTTGTGGAATGAAGGGCTTCTTTTGATAAGGGCTTCTGTTTACACTGCTGTTATATCTGGTGTATGCCTTTTGGCTTGGTATGGTAGGAATAAGGCTAAGGCTTTTGTTGAGGGCAGTTTGTTGCCTTCTGTTTGTTCTGCAATCAGTGAGTACATTGAGCGTGATATTCAGTTTGGTAAGGTTAGGAGAATCTCACCATTGAGCATAACTTTGGAGTCGTGTTCATTTGGGCCTCACAAGGAGGAGTTTTCTTGTGCTGAGGCACCAACAGTTAAGCTGAGGATTCATCCTTTCTCGAGCTTGAGGAGGGGGAAGTTGGTGGTCGATGCGATCTTGTCGCAACCAAGCCTGTTGGTGGTACAAAAGAGAGACTATACTTGGTTGGGAATACCGTCGCCATCTGAAGGTGGCTTGCAGAGGCACTTGTCGACTGATGAGGGGATTGATCATCGTACTAGAACTAGGAGGATTGCTCGGGAGGAAGCAGTTGCTCGGTGGGTGTTGGAAAGGGATGATGCAGCTAGGGAGGCTGCAGAGATGGGTTTCTTTGTTTCTGAGTCAAATTCCGATGATTTAAAGGAGATTGCAGACCACTCCGTAAAAGAAACAGAGTTCAAGTCCTTTTCCTGTACGAATGAGGGTAAACATGATCATCATTGCATGGACACAGGTGTTGACTATGATACGAAACATGCAGATTTGGAAAAATCATTTGGAGTGGAATTTCCTCGTTCCGGGCTTGGATTTTGGTCCGCAATAATAAATGGGCATAGGAACCACAAATTTAAGAGGAAGGCTAATAGGAGGGATGTTTGTGCTTCTGGTGTTGCTATTAATAGAAGAATTCTCGAACGCAGTTCATTGGCAGCACAATCGTACTTTCATGATCAATCACATGGAAAGTTTGGGGAGCCTTCATCATCTTATAGATGTTTTGATTTTGTGAACCATGATATGCATTCAATGAAAACTGAGGTTGAAAAAAATGCAGAAGCTGTTGTCAGTGGTGTCGATAACCAAAATGGAACACAGTTCAGAGATTCAAGAAGTCGGTCACCTTTGTCAAATGAAAATGTAAATGGTGATTCAGAATATTTAAAATTTGTCCGTGATCTGACATCACACACAAGAGAGAGTAAACATGAGAATTTTCAATCTAGTAAAGATGTTGCAGAACCTGCTAATGCTAATAATAGTACAGAGAAAAATGAGGAGTTTGGAATTAATGTTTTAGACAGTCAAATCAATAATAATACCACTGGGGTCCAAAGAGATTTGGTTCCTGAAGATGTTGATTCAATGCAACCTAGGTCTCAATGGGCAACACATTTTCAAGTTCCATTTGAGGCTTTGATTGTGAAGTTGGGCTTAACCTCATCATTTAGAAATATTGAGGAGTTGATATCACGTTTCCTTTCTGGCCCCATTGAAAACTTGAAGTCCGATGCAGGTGTAAAAGTTGAAGATATTGTTGCTGAACCTGTTGATGGGGTTGATGTTTCGCAATCTGATGGCCTCACTAAGATGATTCCTGTTACATTGGATTCTGTTCATTTTAGAGATGCAACTGTGATGCTACTTGCATATGGTGACAGGGAAGCCAGGGAGATGGAGAATGTCTATGGTCATGTGAAGTTTCATAACCACTATAGCCGTGTAAATGTACAACTGAGTGGAAACTGTAAGACTTGGAGGTCTGATGTCATATCTGAAGATGGTGGCTGGTTGTCTGCCAATGTTTTTGTTGACATTATTGAGCAGAAATGGCATGCTAATTTGAAAATTGACAATCTTTTTGTCCCGCTGTTTGAAAGGATCCTAGAAATTCCAATTACATGGTCTAAAGGCAGGGCCAGCGGTGAGGTTCACGTGTGCATGTCAAAGGGCGAAACTTTCCCAAACCTTCATGGACAGCTTGACGTGACAGGGTTGAACTTCCAACTATTGGATGCTCCATCATGTTTTTCGAACATATCAACAAGTTTGTGTTTTCGTGGTCAAAGAATATTTTTACACAATGCAAATGGATGGTTTGGCAGTGTTCCTCTAGAAGCATCAGGAGATTTTGGCATTAATCCTGACGAAGGAGAATTTCATCTTATGTGTCAGGTTCCTGGTGTTGAAGTGAATGCATTGATGAGAACTTTCAAGATGAAACCTCTACTGTTCCCGCTAGCTGGATCAGTCACTGCTCTATTTAATTGTCAAGGCCCGCTGGATACTCCAGTGTTTGTGGGCACTGGAATGGTTTCTAGGACATTCTCTTCTTTAAATGTTGACACTCCTGCTTCTGTAGCATCTGAAGCACTTACTAAAAGTAAAGAGGCTGGTGCACTGGCAGCATTTGATCGTGTTCCATTTGCATATGCATCCGCCAATTTTACTTTCAACACGGATAATTGTGTTGCTGATTTATATGGAATTAGAGCAACTCTTGTGGATGGAGGTGAAATTCGAGGGGCTGGGAATGCATGGATATGCCCAGAGGGGGAGTTGGATGAGACAGCCATAGATGTGAACCTCTCTGGAAGTTTGGCCTTTGAAAAAATCATGCTTCGTTACATTCCCAGTTATCATCATCAGATGCCACTCAAATTTGGGGTTTTAAGTGGAGAGACAAAACTTTCTGGAGCTCTTTTAAGACCGAGGTTTGATATAAAATGGACTGCTCCTACAGCGGAAGGATCTTTTGTGGATGCTAGAGGCGATATCATAATCTCACATGAGTTCATCACCATCAATTCTGCTTCTGCAGCATTTGATTTGCATATGAAAGTTCAAACATCTTATTCTGATGATTTGTATCTAAAAAGAGATGAGTCTTATGCTCCAAAAGCCATTCCATTCACTGTTGATGGAGTTGAGTTAGATTTGCGGATGCGTGGGTTTGAATTCTTCAGTTTAGTTTCTACTTATACTTTGGATTTTCCGAGGCCTTTGCTTTTAAAAGCAGCTGGAAGAATCAAGTTTCAGGGAAAGGTTTTAGAACCTAGTATCACTAGTGAGCAGAATTTTGACAAGAATAAGCATGATGCGCAAACATTGGAGAAAGCAAATGGGAAAAGTCTTGTTGGTGAGGTTTCAATTACTGATCTCAAACTGAATCAGTTAATGCTTGCACCTCAGCTGTCTGGGTTGTTGAGAGTTTCTCCTGAGTATATCAAGTTGGATGCGTCTGGAAGACCTGATGAAAGTCTTGCAGTGGAGTTTGTTGGGCCACTACAGCCCAGTAGTGAAGATGGTCTGATAAATGGAAAACTTCTGTCCATTTCGCTTCAGAAGGGGCAGTTGAGGGTTAACCTTGGTTTCCAACCATCTCATTCTGCTAACTTGGAGGTACGGCATTTTCCACTTGACGAGTTGGAGCTTGCTTCTCTCAGGGGAACTATACAGAGGGCAGAAATCCAGCTTAACCTTCAAAAAAGAAAAGGGCATGGAATCCTATCTGTACTTCGGCCAAAGTTCAGTGGTGTGCTTGGTGAAGCCCTGGATGTCGCAGCTAGGTGGAGTGGAGATGTTATCACTATTGAAAAAACTGTTTTGGAACAAAGCTACAGCCATTATGAGCTTCAGGGTGAATATGTGTTGCCTGGATCCCGAGACCGTAACCCTGTTGACATAAAAGGGGATGGCTTTCTGAAAAGGCTAATGTCTGGGCATCTTGGTAGTGTTATATCCTCAATGGGCCGGTGGAGAATGAAGCTTGAAGTTCCGAGAGCTGATGTTGCTGAGATGCTTCCTCTTGCAAGGCTTCTTTCTCGAAGTACAGATCCTGCTGTTCTTTCAAGATCAAAGGATTTTTTTGTTCAAAGTTTGCAGTCGGTGGGGTTATATTCTGCGAGCACCCAACAAATGCTTGAGTTAATAAGGGGGCATCATGCTCCATCAGATGCTGTTGTTCTTGAAGATTTAAGCTTACCTGGTTTATCTGAACTCAAAGGTCGCTGGCGTGGCTCTCTTGATGCAAGTGGTGGAGGGAATGGAGACACCCTGGCAGAGTTTGACTTTCATGGGGAGGATTGGGAGTGGGGAGACTACAAAACTCAGCGTGTTCTAGCTGTTGGTGCTTACAGTAATGATAATGGTCTGCATTTGGAGAAAATATTTATTCAAAAGGATAATGCCACCATTCATGCTGATGGAACTTTGTTAGGGCCTAAAACAAACCTTCATTTTGCTGTTTTAAATTTTCCTGTTAGTCTGGTTCCTACGGTAGTTCAAGTTATTGAGTCTACAGCAACAGATCTTGTTCATTCTCTGCGGCAATTGTTAGCACCCATTAGGGGTATATTGCACATGGAAGGAGATCTTAGAGGAAGTTTAGCAAAACCAGAATGTGATGTGCAAGTAAGGCTCCTGGATGGTGCCATCGGTGGAATTGATCTTGGACGAGCAGAAGTTGTTGCCTCTCTAACCTCAACTAGTCGTTTTCTATTCAATGCAAAACTTGAACCTATAGTCCAAAACGGCCATGTATTAGTTCAAGGAAGTATTCCTGTTGCTTTTGCACAAAATAGCATGTCACAGCAAGATGTAGAGTTAGATAAGAGAGGGGCTAATTGGGTTCCTGAGTGGGTGAAGGAGAAGAATAGAGGGACCACCGAGGACTCTGACGACAAAAAAGCTTCTAGAGACAGAAATGAAGAAAGTTGGAACAGTCAATTAGCAGAAAGCCTTAAAGGTTTAAATTGGCAAATTTTAGATGTTGGAGAAGTCAGGGTTGATGCTGATATAAAAGATGGGGGAATGATGTTGGTGACAGCTTTATCTCCTTATGCCAATTGGCTTCATGGCAATGCTGATGTCATGCTTGAGGTCCGGGGAACAGTTGATCAACCGGTGCTTAATGGCCATGCATCATTCCACAGGGCATCGATATCTTCACCAGTGTTGCGAAAGCCATTCACCAACTTTGGTGGGACTGTTACTGTGAAATCAAACAGGTTATCCATCACCTCAATGGAGAGTAGGGTAAGCAGAAAAGGGAAGTTGCTTGTAAAAGGGAACCTTCCTCTCAGAACTAGTGAAGCAGCCCCAGATGACAAGATCGAGTTGAAGTGTGAAGCTCTGGAAGTGCGAGCAAAAAACATTTTAAGTGGTCAGGTTGATTCCCAGGTGCAAATAACTGGTTCCATTTTGCAACCAAACATATCTGGGAATATTAAACTTAGTCAGGGAGAAGCATATTTGCCACATGATAAGGGTGGTGGTGCAGCTTCCAATAGATTCCCATCAAATCGGTCTATGCTTCCTGCTGGCAGTGTTAGTCGATCATTAGGTTCAAGATATGTTTCACGGTTTTTCAGATCAGAACCTGCTTCTTTAACGACCCAAATTTCTCAATCCTCTGGCTCTGTTAGTAAATCAAGTCAGGTTGAAAAGGACATTGAGCAAGTACAGATAAAACCAGATATGGAAGTATACCTCAGCGATTTGAAGCTTGTGCTTGGACCAGACTTGAAGATAGTTTATCCTTTGATTCTTAATTTTGCTGTTAGTGGTGAGCTTGAGCTGAATGGTCTTGCCCATCCTAAATGTATAAAACCCAGAGGCATACTGGCATTTGAGGGTGGTGAAGTTGATTTAGTTGCGACGCAGGTGCGGTTAAAAAGGGAGCACCCGAATATTGCAAAGTTCGAACCTGAGTATGGACTAGACCCAATGCTAGATTTAGCACTGGTTGGGTCCGAGTGGCAATTTAGAATTCAAGGTCGCGCGAGCAATTGGCAAGAGAAGCTAGTGGTGACCTCAACACATTCGGTGGAACAGGATGCATTGTCACCTACTGAGGCTGCAAGAAGATTTGAGAGTCAGTTAGCAGAATCAATTTTGGAAGGCAATGGTCAACTTGCATTTGAAAAACTTGCAACGGCTACTCTTGGGAAATTAATGCCGCGAATAGAAGGAAAGGGAGAGTTTGGCCAGGCCAGGTGGAGGGTCGTGTATGCGCCTCAGATCCCTAGTTTGGTTTCTGCTGATACTGCTGTTGATCCTGTCTCATTACTTGCCAGTAATATATCGTTTGGTGCGGAAGTTGAAGTCCAGCTCGGGAAACGCCTTCAGGCCTCGATCGTCAGGCAAATGAAGGAATCAGAGATGGCGATGCAGTGGACGTTGAGCTATCAACTTACAAGCCGCTTGCGTGTGCTCCTACAATCCTTGCCATCCAAACGCCTTCTTTTCGAATATTCTGCTACATCCCAGGATTAA 7527 0.4382 MHGAHSSIRDRTHEFHSIADRLKKSSSGLNGPTTTSTASSSSRSEEQRSNIALQSEFNRRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTGVIKQDITALNSAVVDLQLLSNSRNENGSVSTDTTSHSTTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQLFSSTASKDSANPFVRQRPLATRSAAAGASNAPAPPWASGSQSASQAIPKKQVDGESQPLLSQQQQQQQQMVPLQDSYMQSRAEALQNVESTIHELSSIFNQLATLVSQQGEVAIRIDENMDDTLANVEGAQGALLKYLNSISSNSQFQRQRNENDGVLLSLTGDKPALCLECPATAEFVLGTEKRNFLVPRVRRRNFPKRGLRRCSVSAKKQGDPVSQSLRFPQFCVQNVNFLRRNLVSTSGSRLNCTREPFYKNKALVSYLNPLWNEGLLLIRASVYTAVISGVCLLAWYGRNKAKAFVEGSLLPSVCSAISEYIERDIQFGKVRRISPLSITLESCSFGPHKEEFSCAEAPTVKLRIHPFSSLRRGKLVVDAILSQPSLLVVQKRDYTWLGIPSPSEGGLQRHLSTDEGIDHRTRTRRIAREEAVARWVLERDDAAREAAEMGFFVSESNSDDLKEIADHSVKETEFKSFSCTNEGKHDHHCMDTGVDYDTKHADLEKSFGVEFPRSGLGFWSAIINGHRNHKFKRKANRRDVCASGVAINRRILERSSLAAQSYFHDQSHGKFGEPSSSYRCFDFVNHDMHSMKTEVEKNAEAVVSGVDNQNGTQFRDSRSRSPLSNENVNGDSEYLKFVRDLTSHTRESKHENFQSSKDVAEPANANNSTEKNEEFGINVLDSQINNNTTGVQRDLVPEDVDSMQPRSQWATHFQVPFEALIVKLGLTSSFRNIEELISRFLSGPIENLKSDAGVKVEDIVAEPVDGVDVSQSDGLTKMIPVTLDSVHFRDATVMLLAYGDREAREMENVYGHVKFHNHYSRVNVQLSGNCKTWRSDVISEDGGWLSANVFVDIIEQKWHANLKIDNLFVPLFERILEIPITWSKGRASGEVHVCMSKGETFPNLHGQLDVTGLNFQLLDAPSCFSNISTSLCFRGQRIFLHNANGWFGSVPLEASGDFGINPDEGEFHLMCQVPGVEVNALMRTFKMKPLLFPLAGSVTALFNCQGPLDTPVFVGTGMVSRTFSSLNVDTPASVASEALTKSKEAGALAAFDRVPFAYASANFTFNTDNCVADLYGIRATLVDGGEIRGAGNAWICPEGELDETAIDVNLSGSLAFEKIMLRYIPSYHHQMPLKFGVLSGETKLSGALLRPRFDIKWTAPTAEGSFVDARGDIIISHEFITINSASAAFDLHMKVQTSYSDDLYLKRDESYAPKAIPFTVDGVELDLRMRGFEFFSLVSTYTLDFPRPLLLKAAGRIKFQGKVLEPSITSEQNFDKNKHDAQTLEKANGKSLVGEVSITDLKLNQLMLAPQLSGLLRVSPEYIKLDASGRPDESLAVEFVGPLQPSSEDGLINGKLLSISLQKGQLRVNLGFQPSHSANLEVRHFPLDELELASLRGTIQRAEIQLNLQKRKGHGILSVLRPKFSGVLGEALDVAARWSGDVITIEKTVLEQSYSHYELQGEYVLPGSRDRNPVDIKGDGFLKRLMSGHLGSVISSMGRWRMKLEVPRADVAEMLPLARLLSRSTDPAVLSRSKDFFVQSLQSVGLYSASTQQMLELIRGHHAPSDAVVLEDLSLPGLSELKGRWRGSLDASGGGNGDTLAEFDFHGEDWEWGDYKTQRVLAVGAYSNDNGLHLEKIFIQKDNATIHADGTLLGPKTNLHFAVLNFPVSLVPTVVQVIESTATDLVHSLRQLLAPIRGILHMEGDLRGSLAKPECDVQVRLLDGAIGGIDLGRAEVVASLTSTSRFLFNAKLEPIVQNGHVLVQGSIPVAFAQNSMSQQDVELDKRGANWVPEWVKEKNRGTTEDSDDKKASRDRNEESWNSQLAESLKGLNWQILDVGEVRVDADIKDGGMMLVTALSPYANWLHGNADVMLEVRGTVDQPVLNGHASFHRASISSPVLRKPFTNFGGTVTVKSNRLSITSMESRVSRKGKLLVKGNLPLRTSEAAPDDKIELKCEALEVRAKNILSGQVDSQVQITGSILQPNISGNIKLSQGEAYLPHDKGGGAASNRFPSNRSMLPAGSVSRSLGSRYVSRFFRSEPASLTTQISQSSGSVSKSSQVEKDIEQVQIKPDMEVYLSDLKLVLGPDLKIVYPLILNFAVSGELELNGLAHPKCIKPRGILAFEGGEVDLVATQVRLKREHPNIAKFEPEYGLDPMLDLALVGSEWQFRIQGRASNWQEKLVVTSTHSVEQDALSPTEAARRFESQLAESILEGNGQLAFEKLATATLGKLMPRIEGKGEFGQARWRVVYAPQIPSLVSADTAVDPVSLLASNISFGAEVEVQLGKRLQASIVRQMKESEMAMQWTLSYQLTSRLRVLLQSLPSKRLLFEYSATSQD* 2509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1307 2508 MobiDBLite consensus disorder prediction 22 54 - -
Aev08g1307 2508 CDD SNARE_syntaxin5 253 319 - -
Aev08g1307 2508 Pfam TamB, inner membrane protein subunit of TAM complex 2093 2491 IPR007452 GO:0005887|GO:0009306
Aev08g1307 2508 MobiDBLite consensus disorder prediction 23 54 - -
Aev08g1307 2508 PANTHER EMBRYO DEFECTIVE 2410 428 2508 - -
Aev08g1307 2508 MobiDBLite consensus disorder prediction 209 249 - -
Aev08g1307 2508 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 250 312 IPR000727 -
Aev08g1307 2508 MobiDBLite consensus disorder prediction 775 799 - -
Aev08g1307 2508 MobiDBLite consensus disorder prediction 1964 1990 - -
Aev08g1307 2508 ProSitePatterns Syntaxin / epimorphin family signature. 256 295 IPR006012 GO:0005484|GO:0006886|GO:0016020
Aev08g1307 2508 SUPERFAMILY t-snare proteins 54 305 IPR010989 GO:0016020|GO:0016192
Aev08g1307 2508 Coils Coil 1562 1582 - -
Aev08g1307 2508 MobiDBLite consensus disorder prediction 196 249 - -
Aev08g1307 2508 Gene3D - 52 305 - -
Aev08g1307 2508 MobiDBLite consensus disorder prediction 827 842 - -
Aev08g1307 2508 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 5 24 IPR021538 -
Aev08g1307 2508 SMART tSNARE_6 245 312 IPR000727 -
Aev08g1307 2508 MobiDBLite consensus disorder prediction 815 842 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1307 Aev-Chr8 8234131 8252049 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1307 2 319 SNARE and Associated Proteins AT3G24350 62.647 7.46e-112 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1307 - - gmx:100779257 3264.17