Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1305 ATGGCGAGTGTAAAGAAAGAAGATGCCAGAATTGAAAAACTTATACGTGCCCTTTTGAAACTCCCTGGAAATAGAAGATGCATCAATTGCAACCTCTTGGGACCTCAATATGTGTGCACAACTTTCTCCACATTTGTCTGCACAAATTGCAGTGGAATACACCGAGAGTTTACTCACAGAGTAAAATCAGTATCCATGGCAAAATTTACTTCTGATGAAGTTGAAGCTCTTCAAGCAGGTGGCAATGAGAAAGCCAAGCAGATTTATTTCAAATTATGGGACCCTATGCGGAATTCTTTCCCCGATTCCAACAATATACTCAAACTTAGGGATTTCATCAAGCGTGTGTATGTCGACAAAAGATTCGCTGGCGAAACGAGTTCTGCAGAGCTTCCCAGGGTTAGGCTGAGTGAGAAGGAGGAACCGAACCAAAGTAGGAGCATTACTACTTCATTTCGTATTGAGCCTAAAAGTTCAGATAGTGGAGATAGATTTGAAAGACATTCCAGTGAAAGATCCAGTCCTAGTTTTAGAAGTGAAGACAACATTGTCAAAGTTTACTTTGATGACAGAAGAAGCCCAAGATATGCTCAAAACTACTCCAGGCATGCCAATGCCAGCCATGGCCGAAAGCCGGTAAAATTTGAGGTTGTTGATGACAGATTCAAAGATGATGAGATTAGAAACCGAAAGCTTTCAAATTTGGAATCGAAGCTAAGACAGCTTCAACCTAGTTTCCAGAAGAATGTAGAGGAACCGCAATCGCCGGTCGTGCGCTCTGTTGGAGAAGTATTAGTAGGTCCATCTCCGAAAGTAGGTGAAACTTCTCAAGCATGCAATAGGGAACCTCATGATGTTCAACAGAATAAGGCCTCCAATGCTGCTGCTGAAGACAACTGGGCCATATTTGATGATTTTAATCATTCAGTGAACAATGCTGCAGAAACCTCAAACTCAAATACCTGGATATCTTCTGTTACAGAGAAAACACCTCAAGCAACAACATATGCAAATTCTTTAGATCTTTTACTTTTTGAGTTGTCCGCGCCGTTGACTCCAACAACTGGTGTCATGTCTGAGATCTCAACTGGTGACAACAATGATCCAACACCTGCAACCGTAGAAAATGCGAGTACTAGTGGCGATTTCCAGCAGTTTCCATCTACCCCAATAAGGCAGACAACTCCATCACCCAAAAATAGCTATGCTTTATCAATTACACCAACCCTTGCCATTGAGATGGAACAACCTTCTAATGCAGTGCATTCACATGTTGACCTATTCGATGAGGAAGACTACTCGAATGAAGTATCAGATGGGAAGAAACTATCAAGCCTGCAATTTTGTCCTTCTGTATCAGTAGGTAGTAGCTATACAACACAACAACCAATCACACCAATCACACCTGCAGCATCGAAAGACACGCCATCATATGTTCTTAATTCACACGACTCGTCCAATGCTTTTTCTGAAATGTCTCCTCAGTCCACAGCTATACCTGCTCAAGACACTAAACCTGATGTTGCAGTGGAAACCAAGTATAGTGGAAGAAAGGAACTTCCAGAAGACCTTTTCACTTCAAGCTACTCACCTGCCCCTGCTGCACCACTTGCAGGTTGGCAAAATGTTCAACCTCATGACATGGGATTTGGCATGCAGTATTATCCTAATTCAGTGCCTAGCTCAGCATTTCCCATTTCAGCTATGTCTAGAAACCCATTTGATGAAACTCAAGGGAGAACTATAACACACACCTCATCACTTCCAGCTATGACATCTTTGCAAAGTGCACCTTCTGCATCACCAAGAACAGGATTAATGCATGCTTCAAGTTTTGAAGCTTTAGGAATGATGCCTCAGTCCCCAAGTTATGGACCTCCTGCAGTTCATTCACAATCTACCTTCAGTTCAGGATTTCCCTCTGGTGCATACTATGGACAAGTTAATAACAACATGCAATCTCCCAGGCCTGAAGGAGTTTCAAGCTTCAGTAATGACAGAAGCACTTTTGGATCCCTAAGCACAATGCAGGCTTCAGGAGGTGGAGAATACATGACACCCACCACTCCAAATTCATTTTCTAAGAAGGGAGGAAACCCATTTGGAGATGACTAA 2115 0.4251 MASVKKEDARIEKLIRALLKLPGNRRCINCNLLGPQYVCTTFSTFVCTNCSGIHREFTHRVKSVSMAKFTSDEVEALQAGGNEKAKQIYFKLWDPMRNSFPDSNNILKLRDFIKRVYVDKRFAGETSSAELPRVRLSEKEEPNQSRSITTSFRIEPKSSDSGDRFERHSSERSSPSFRSEDNIVKVYFDDRRSPRYAQNYSRHANASHGRKPVKFEVVDDRFKDDEIRNRKLSNLESKLRQLQPSFQKNVEEPQSPVVRSVGEVLVGPSPKVGETSQACNREPHDVQQNKASNAAAEDNWAIFDDFNHSVNNAAETSNSNTWISSVTEKTPQATTYANSLDLLLFELSAPLTPTTGVMSEISTGDNNDPTPATVENASTSGDFQQFPSTPIRQTTPSPKNSYALSITPTLAIEMEQPSNAVHSHVDLFDEEDYSNEVSDGKKLSSLQFCPSVSVGSSYTTQQPITPITPAASKDTPSYVLNSHDSSNAFSEMSPQSTAIPAQDTKPDVAVETKYSGRKELPEDLFTSSYSPAPAAPLAGWQNVQPHDMGFGMQYYPNSVPSSAFPISAMSRNPFDETQGRTITHTSSLPAMTSLQSAPSASPRTGLMHASSFEALGMMPQSPSYGPPAVHSQSTFSSGFPSGAYYGQVNNNMQSPRPEGVSSFSNDRSTFGSLSTMQASGGGEYMTPTTPNSFSKKGGNPFGDD* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1305 704 PANTHER ARFGAP/RECO-RELATED 1 702 IPR044820 GO:0005096
Aev08g1305 704 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Aev08g1305 704 Gene3D Arf GTPase activating protein 2 132 IPR038508 -
Aev08g1305 704 CDD ArfGap_AGFG 12 122 - -
Aev08g1305 704 MobiDBLite consensus disorder prediction 646 696 - -
Aev08g1305 704 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Aev08g1305 704 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Aev08g1305 704 MobiDBLite consensus disorder prediction 133 177 - -
Aev08g1305 704 Pfam Putative GTPase activating protein for Arf 13 123 IPR001164 GO:0005096
Aev08g1305 704 MobiDBLite consensus disorder prediction 457 476 - -
Aev08g1305 704 MobiDBLite consensus disorder prediction 378 400 - -
Aev08g1305 704 MobiDBLite consensus disorder prediction 157 175 - -
Aev08g1305 704 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Aev08g1305 704 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Aev08g1305 704 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Aev08g1305 704 MobiDBLite consensus disorder prediction 646 704 - -
Aev08g1305 704 PANTHER ARFGAP/RECO-LIKE ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1305 Aev-Chr8 8224799 8228699 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1305 10 122 C2H2 Transcription Factor Family AT3G07940 33.898 5.25e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1305 - - ahf:112707813 722.235