Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1296 ATGGAGGACCAAGCTAATCAGAGCCAGGGCCAAGCTCCTCCACCGCCACTTCCTCCGCCGGAATCTCAGCCTCCGCCGTCGACGGCGGAGGAGGATGAGGAAGAGGAAGAAGACGATTCTAAGAAAGAGGAGGAGGAACTGGTCGCGAAGGTTAACAGGCTCATGGAGAAGATCACTTCCGCTCCTGATAACCCTAAACCTGCTGTTCTTCACGCCATCGCATCTATTCTCGAAAAGCAAGAGTTGCGATACATGGAAGAGAATGGCCATTCGTCCTCGAGTAATGCTCGTGCTGCCCACAACATTGGGCGCCTTGGGAGCTTAATTCGGGAAAACGATGAGTTCTTCGAGTTAATTTCTTCTAGGTTTCTGTCAGAATCGACATACTCAACTGCCATTCAAGCTGCTTCTGCAAGACTTCTCTTAAACTGTTCGCTAACTTGGATTTATCCTCACGTGTTTGAAGAGCCTGTGATAGACAACATCAAAGAGTGGATGATGGAAGATTATTCTAGATTTTCCGCTGAAGAGCTTAATCTGAAGCATAGTTCAGGTAGAAAGGAAGCATCAGATTCCGAAATGTTGAAAACCTATTCTACTGGACTCCTTGCTTTGTGTTTGGTTGGAGGAGGTCAAGTTGTTGAAGACGTATTGACATCTGGATTGTCAGCGAAGCTTATGCGTTATCTACGCTTGCGTGTGCTGGGAGAGACAAGTAGTAGCCAGAAGGAAACTAGTCATTTGACAGAGAGTAAGCATGCATCTGGGAATACATCAGTTAGAGGTAGAGACGATGGTCGTGGAAGATTTCGCCAGCACCTGGAATCAAGTCATTTGGATGATTCAAGGATGGCTGATGAGAGATCTTTAGATGACCTAACTCTTGAAAGGGGTGCTGATAGAAGCATTAGTGGGCAAACTTGCCAGGAAGATTCTTGGATTGATGGTGAACCCCCTGATGTTGTCGGCGAAGGTACTAATATCTGTGAGGCTGATACTGAAGGGGAGGATAGATGGCGTGGTAGAGATATCAATGATGGAAGGATGAAATATGGTGAGCATGATGACAATGTGAGAGATGACTCTTCAAGGCGGCGTGCAAATCGTGGATGGGGAAGGTCCAAAGGGAAACGAGTCAGCGATGGGACTGTAGAAAGTGAAACTATTTTGTCATCTCCTGGATCTGGTAGTCGGTTAGGACAGGGACGGAGTGTCAGAGATAGGAGCATGTTGAGGAATGTTGACAGTAGAAGAGGGCCTGATTCTAAGAAGAATATTTCCAGGAACACTTCTGATGCTTCTGTTCTGGAGAGAGGAGATAATGATGATTGCTTCCAAGGGTGCCGTATTGGAAGTAAAGATATCTCTGATATTGTTCGGAAAGCTGTCCGGGCTGCTGAAGCTGAAGCTAGAACTGCCAATGCACCTGAAGAAGCTGTCAAAGCTGCTGGTGATGCTGCTGCTGACCTTGTCAAAACTGCAGCTTCAGAGGAATTTAAGTCCACTAATGACGAAGACGCAGCTATTTTGGCTGCTTCAAAAGCTGCATCAACTGTTATTGATGCTGCATCTGCAGTTGAAGTTTCAAGGAGCTCCATCAGCACTAATGCTGAGGCAGAGAATGTGAGTGCTAAAGAAACAGAAATTGTGGAGGATGCTGAAGATTATTTCATTCCAGATACTCAATCCCTTGCACAATTGAGGGAAAAGTATTGCATTCAGTGTCTTGAGCTACTTGGAGAATATGTTGAAGTTCTTGGCCCGGTGTTACATGAGAAAGGGGTAGATGTGTGTCTTGCACTTCTGCATCAGAATTCTAAACATCGGGAGGTATCCAAGGTTGCATTTCTGCTGCCTGATGTAATGAAGCTGATCTGTGCTTTGGCTGCTCATAGGAAATTTGCTGCTTTATTTGTGGACCGTGGGGGAATCCAAAAGCTGCTTGCTGTTCCTAGAATGGCACAAACTTTCTTTGGTCTTTCTTCTTGTCTATTTACCATCGGTTCTCTTCAGGGCATAATGGAACGGGTTTGTGCTCTTCCATCAGATGTTGTTTATCATGTTGTTGAGTTGGCTCTCCAACTCCTTGAGTGCAACCAAGACCAAGCCCGGAAGAATGCAGCATTGTTTTTTGCTGCTGCATTTGTCTTCAGAGCTGTCCTTGATGCTTTTGATTCCCAGGATGGATTACAGAAATTACTGCGTCTTCTGAATGATGCTGCTTCGGTAAGGTCGGGAGTAAATTCTGGAGCCTTGAGCTTACCTAATACAGGATCACTTAGAAATGATCGATCATCTGCAGAGGTCCTTACATCATCTGAGAAGCAGATTGCCTACCACACCTGTGTAGCTTTACGGCAATATTTCAGAGCACATCTTCTTTTATTAGTGGATTCAATTCGCCCAAACAAAAGCAACCGTGGTGCTGCTCGTAATATTTCAAGTGCAAGGGCTGCGTACAAGCCACTTGATATTAGTAACGAGGCAATTGATGCAGTATTCCTACAATTACAGAAAGACCGGAAGCTTGGTCCTGCATTTGTGAGAACACGTTGGCCAGCAGTGGAGAAGTTCTTGGCTTCTAATGGGCATATTACTATGTTGGAATTGTGTCAGGCCCCACCCGTGGAGCGGTATCTGCATGATTTGCTTCAATATGCACTGGGTGTTCTGCATATCGTGACATTGGTACCTAACAGCCGAAAGATGATCGTTAATACAACATTGAGTAATAGTCGTGTTGGTATTGCAGTGATTTTGGATGCTGCAAATATTGTTAGTAGTCATGTGGACCCTGAGATAATTCAGCCAGCATTGAATGTTTTAGTCAACCTTGTTTGCCCCCCTCCATCAATCAGCATTAAACCTGCTTTAGTTACACAAAGTCAGCAGTTTGGTTCTTCCCAGACCTCAAGTGGTCCATCCTTGGAGACTAGAGATAGAACTGTTGAACGTAACATCTCAGATCGAGCTGCTCCTGGTACCAGCCAGACTGATACCCGGGAGAGGAATGGGGAGTCTAGTGCTGTAGATCGAGGCAACGCTGCAGTACCTAGTGCACAGACTGTTAATAGCACTCCGCAGACTCCAGTTGCTGCTGCAACTTCAGGATTGGTTGGTGACCGTAGAATCTCCTTGGGTGCAGGAGCAGGTTGTGCTGGCCTTGCTGCGCAACTAGAACAAGGATATCGTCAAGCGAGAGAAGCTGTCCGTGCTAATAATGGCATCAAGGTTCTCCTGCATCTCCTCCAACCACGCATATATTCACCTCCTGCTGCACTAGATTGTCTTCGTGCTCTAGCCTGCCGAGTCTTGCTTGGATTAGCTAGGGATGATACTATTGCACACATATTGACAAAGCTTCAGGTTGGGAAAAAGCTGTCAGAACTAATTCGGGATTCAGGTAGCCAGACGTCTGGAACAGACCAGGGTAGGTGGCAGGCGGAGCTTTCCCAGGCTGCAATTGAGCTAATTGGGATTGTGACTAATTCAGGGCGTGCAAGTACATTAGCTGCTACTGATGCAGCTACTCCTACCTTAAGGCGCATAGAAAGAGCAGCTATAGCTGCTGCGACTCCTATTACTTATCATTCAAGGGAACTGTTGCTCCTAATTCATGAGCACCTACAGGCATCTGGATTGTCCCAAACAGCTTCTGCGTTGCTCAGAGAGGCTCAGTTGACTCCTTTACCATCATTGGTTGCTCCATCTTCTCTAGCACAACAGCCCACCACACAGGAAACTTCTTCAACCGTAATTCAATGGCCCTCTGGTCGTACCCCTTCTGGATTTCTCACTAATAAATCAAAGATCAATGGAAGGAATGAGGATGCAAACTTGAAAAGTGATCCTGTCTCTGCAAAGAAAAAATCACTGACATTCTCTTCATCCTTTGGCTCACATTCAAAACGTCACCTAGTTGATTCTCAGCAGTCTTCAGTCAGAAAGTGGCTAAGTACTGGAAAAGAGGCTTCAGAAACTAGTAATGTAGAGACTCCATCCGAATCTTCTGTGAAACATAACATTGACTCTGGTTCTCAGTTTAAGACTCCAATCAGCATGCTAACAAAGCGTAAGTTCTCTGATTTAAAGGATACTTCTGGATTGTTATCACCACCTGGAAAGCGATTCAATGTTTGGGATCAAGGACTTCGTTCTCCTATTTTTTCAAGTTCACTTCGGAAAAGCAGCGGCCATATTGATGCTTTTGGACTTTCTACACCAATCTCTAGCTTGAGAGGTCAACAAGGTCATTGTACAACTGACTATGGGGATGAGAGTCAGTTTAGTGTCTCGAATCCAGTTCAGATGACACCATCCTCCCAAGTATTAAATGACCTTCAACCCAACAACCAGGAGCGTATAACACTAGATTCTCTAGTGGTTCAGTATCTGAAGCATCAGCATCGCCAATGCCCAGCTCCTATTACCACTCTTCCTCCACTATCTCTTCTACACCCACACGTTTGTCCTGAGCCAAAGAGATGCCTTGATGCCCCTTCTAATGTAACTGCTCGGCTTGGCACACGTGAATTTAAACTTTCATATGGAGGAGTTCACGGCAATCGCAGGGATCGTCAGTTTGTTTACAGCCGGTTTAGGCCATGGCGCACTTGTCGTGACGACGCTGGTGCCTTGTTAACATGCATTACATTTCTTGGGGACTCTTCTCGTATTGTCGCTGGGAGCCACAATGGAGAGCTCAAATTGTTCGACTCCAACAACAATAGTGTGGTGGAGAGCTTCACTGGTCACCAGTCTCCTTTGACGCATGTTCAGTCTTATGTTTCTGGTGAGACCCAGCTGTTGCTTTCTTCAAGCGTTCTCGATGTCAGGTTGTGGGATGCGACGTCAATATTAGCTGGTCCTACCCATTCATTCGAAGGATGCAAGGCTGCTAGGTTTAGCAATTCTGGGAATGTTTTTGCAGCACTGTCAATTGAATCTGCCAGGCGAGAAATCCTTCTGTATGATGTCCAAACATGTCAGTTAGAATCGAAGTTGACAGATACATTTGCAGCTTCTACAGGGCGTGGTCATGTTTATTCTTTAATCCACTTTAGCCCTTCTGATTCCATGCTGCTTTGGAATGGTGTCTTGTGGGACCGGCGGGTTTCTGGTCCTGTCCATCGCTTTGATCAGTTCACTGACTATGGGGGTGGAGGCTTTCATCCCGCTGGCAATGAGGTCATTATAAACTCCGAAGTCTGGGATCTGCGCAAGTTTAGGCTGTTACGGAGTGTACCTTCGTTAGACCAAACATCAATAACATTCAATGCACGTGGTGATGTGATGTATGCAATCTTGAGGAGAAATCTCGAGGATGTGATGTCGGCAGTCCACACACGACGCGTCAAGCATCCTCTTTTCGCCGCTTTCCGAACAGTTGACGCGATCAACTATTCCGACATTGCTACTATACCTGTAGATCGCTGTGTTCTTGATTTTGCGGCCGAGCCAACAGATTCATTCGTTGGTAGTGACGAAGAGGATTATGTGGGTAATGGCTTTGGTTATTAA 5520 0.4589 MEDQANQSQGQAPPPPLPPPESQPPPSTAEEDEEEEEDDSKKEEEELVAKVNRLMEKITSAPDNPKPAVLHAIASILEKQELRYMEENGHSSSSNARAAHNIGRLGSLIRENDEFFELISSRFLSESTYSTAIQAASARLLLNCSLTWIYPHVFEEPVIDNIKEWMMEDYSRFSAEELNLKHSSGRKEASDSEMLKTYSTGLLALCLVGGGQVVEDVLTSGLSAKLMRYLRLRVLGETSSSQKETSHLTESKHASGNTSVRGRDDGRGRFRQHLESSHLDDSRMADERSLDDLTLERGADRSISGQTCQEDSWIDGEPPDVVGEGTNICEADTEGEDRWRGRDINDGRMKYGEHDDNVRDDSSRRRANRGWGRSKGKRVSDGTVESETILSSPGSGSRLGQGRSVRDRSMLRNVDSRRGPDSKKNISRNTSDASVLERGDNDDCFQGCRIGSKDISDIVRKAVRAAEAEARTANAPEEAVKAAGDAAADLVKTAASEEFKSTNDEDAAILAASKAASTVIDAASAVEVSRSSISTNAEAENVSAKETEIVEDAEDYFIPDTQSLAQLREKYCIQCLELLGEYVEVLGPVLHEKGVDVCLALLHQNSKHREVSKVAFLLPDVMKLICALAAHRKFAALFVDRGGIQKLLAVPRMAQTFFGLSSCLFTIGSLQGIMERVCALPSDVVYHVVELALQLLECNQDQARKNAALFFAAAFVFRAVLDAFDSQDGLQKLLRLLNDAASVRSGVNSGALSLPNTGSLRNDRSSAEVLTSSEKQIAYHTCVALRQYFRAHLLLLVDSIRPNKSNRGAARNISSARAAYKPLDISNEAIDAVFLQLQKDRKLGPAFVRTRWPAVEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLHIVTLVPNSRKMIVNTTLSNSRVGIAVILDAANIVSSHVDPEIIQPALNVLVNLVCPPPSISIKPALVTQSQQFGSSQTSSGPSLETRDRTVERNISDRAAPGTSQTDTRERNGESSAVDRGNAAVPSAQTVNSTPQTPVAAATSGLVGDRRISLGAGAGCAGLAAQLEQGYRQAREAVRANNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSQTSGTDQGRWQAELSQAAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRELLLLIHEHLQASGLSQTASALLREAQLTPLPSLVAPSSLAQQPTTQETSSTVIQWPSGRTPSGFLTNKSKINGRNEDANLKSDPVSAKKKSLTFSSSFGSHSKRHLVDSQQSSVRKWLSTGKEASETSNVETPSESSVKHNIDSGSQFKTPISMLTKRKFSDLKDTSGLLSPPGKRFNVWDQGLRSPIFSSSLRKSSGHIDAFGLSTPISSLRGQQGHCTTDYGDESQFSVSNPVQMTPSSQVLNDLQPNNQERITLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKRCLDAPSNVTARLGTREFKLSYGGVHGNRRDRQFVYSRFRPWRTCRDDAGALLTCITFLGDSSRIVAGSHNGELKLFDSNNNSVVESFTGHQSPLTHVQSYVSGETQLLLSSSVLDVRLWDATSILAGPTHSFEGCKAARFSNSGNVFAALSIESARREILLYDVQTCQLESKLTDTFAASTGRGHVYSLIHFSPSDSMLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTSITFNARGDVMYAILRRNLEDVMSAVHTRRVKHPLFAAFRTVDAINYSDIATIPVDRCVLDFAAEPTDSFVGSDEEDYVGNGFGY* 1840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1296 1839 ProSiteProfiles LIS1 homology (LisH) motif profile. 1197 1229 IPR006594 GO:0005515
Aev08g1296 1839 MobiDBLite consensus disorder prediction 1236 1273 - -
Aev08g1296 1839 MobiDBLite consensus disorder prediction 965 1030 - -
Aev08g1296 1839 SUPERFAMILY WD40 repeat-like 1534 1764 IPR036322 GO:0005515
Aev08g1296 1839 MobiDBLite consensus disorder prediction 408 425 - -
Aev08g1296 1839 MobiDBLite consensus disorder prediction 331 382 - -
Aev08g1296 1839 MobiDBLite consensus disorder prediction 240 269 - -
Aev08g1296 1839 MobiDBLite consensus disorder prediction 296 438 - -
Aev08g1296 1839 MobiDBLite consensus disorder prediction 1 46 - -
Aev08g1296 1839 MobiDBLite consensus disorder prediction 1317 1345 - -
Aev08g1296 1839 PANTHER BNAA03G51310D PROTEIN 1005 1302 - -
Aev08g1296 1839 SMART WD40_4 1532 1572 IPR001680 GO:0005515
Aev08g1296 1839 SMART WD40_4 1620 1658 IPR001680 GO:0005515
Aev08g1296 1839 SMART WD40_4 1575 1615 IPR001680 GO:0005515
Aev08g1296 1839 MobiDBLite consensus disorder prediction 384 399 - -
Aev08g1296 1839 PANTHER VPRBP PROTEIN-RELATED 340 980 IPR033270 GO:0016567
Aev08g1296 1839 PANTHER VPRBP PROTEIN-RELATED 1290 1826 IPR033270 GO:0016567
Aev08g1296 1839 PANTHER VPRBP PROTEIN-RELATED 1005 1302 IPR033270 GO:0016567
Aev08g1296 1839 PANTHER VPRBP PROTEIN-RELATED 36 286 IPR033270 GO:0016567
Aev08g1296 1839 Gene3D - 1533 1836 IPR015943 GO:0005515
Aev08g1296 1839 PANTHER BNAA03G51310D PROTEIN 340 980 - -
Aev08g1296 1839 PANTHER BNAA03G51310D PROTEIN 1290 1826 - -
Aev08g1296 1839 PANTHER BNAA03G51310D PROTEIN 36 286 - -
Aev08g1296 1839 SUPERFAMILY ARM repeat 581 1137 IPR016024 -
Aev08g1296 1839 SMART Lish 1197 1229 IPR006594 GO:0005515
Aev08g1296 1839 MobiDBLite consensus disorder prediction 1236 1286 - -
Aev08g1296 1839 MobiDBLite consensus disorder prediction 1014 1030 - -
Aev08g1296 1839 MobiDBLite consensus disorder prediction 11 26 - -
Aev08g1296 1839 MobiDBLite consensus disorder prediction 27 42 - -
Aev08g1296 1839 MobiDBLite consensus disorder prediction 240 256 - -
Aev08g1296 1839 MobiDBLite consensus disorder prediction 989 1003 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1296 1559 1765 U-box Gene Family AT2G33340 24.444 9.57e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1296 K11789 - gmx:100796030 2721.04