Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1280 ATGGAAAGAAGTAGTAGTAGTAGAGAGAGTACTAGTGGTGGTAGTGCTTATTGTGTTCCTTCCAAGATGGGAGGCATCAGCCTCGAGGAGATCAAAAACGAGAACGTCGATCTGGAACGAATTCCAGTAGAGGAAGTGTTTGAGCAGCTGAAATGTTCAAGAGCAGGTCTATCATCCGACGAAGGAGCCAACAGGCTTCAAGTCTTTGGACCAAACAAGTTGGAAGAGAAAAAGGAGAGCAAGGTTTTGAAGTTCTTGGGTTTTATGTGGAACCCCTTATCATGGGTCATGGAAGCTGCTGCCATAATGGCCATTGCTCTGGCCAACGGTGGAGGAAGACCACCGGATTGGCAGGATTTCGTGGGTATCATTGCTCTGTTGCTGATTAACTCCACAATCAGTTTCATTGAGGAAAACAATGCTGGCAATGCAGCTGCTGCACTTATGGCTGGTTTAGCTCCCAAAACCAAGGTTCTGAGAGATGGCCGATGGACTGAACAAGATGCTGCGATTTTGGTCCCAGGAGACATAATCAGCATCAAATTGGGAGACATCATTCCTGCTGATGCCCGTCTTCTGGAGGGTGATGCTTTGAGTGTTGATCAGTCTGCTCTAACTGGAGAATCTCTTCCTGTGACAAAGAACCCCTCTGATGAAGTGTTCTCTGGGTCAACAGTTAAGAAGGGTGAGATTGAAGCAGTTGTGATTGCCACTGGTGTCCACACCTTCTTCGGTAAAGCAGCTCATCTTGTGGACAGCACAAACCAAGTTGGTCACTTCCAGAAAGTGCTTACAGCCATTGGTAACTTCTGTATTTGCTCAATTGCTGTTGGAATATTGATCGAGCTCATAGTCATGTACCCGATACAGCACCGCAAGTACAGAGATGGGATTGATAATCTGTTGGTTCTCTTGATTGGAGGGATTCCAATTGCCATGCCAACTGTCTTGTCTGTTACTATGGCTATTGGTTCTCACAGGCTCTCCCAGCAAGGTGCAATCACAAAGAGAATGACAGCAATTGAGGAAATGGCGGGTATGGATGTCCTCTGCAGTGACAAACTGGACTCTGACCCTAATAAGCTGACTGTTGATAGAACCTTGATTGAGGTCTTTACCAAGGGTATTGAGAAGGAGTATGTTATCCTTCTTGCTGCAAGGGCTTCTAGGACTGAGAATCAGGATGCCATAGATGCTGCAATTGTTGGGATGCTTGCTGACCCAAAGGAGGCTCGAGCTGGTATCAGGGAGGTCCATTTTCTCCCTTTCAATCCTGTAGACAAGAGGACTGCTCTAACATACATTGATTCAGATGGAAATTGGCACCGAGCTAGCAAAGGTGCTCCTGAGCAGATATTGAACCTCTGTAACTGCAAAGAGGATGTCAGGAAGAAGGCTCATGCAGTTATTGATAAGTTTGCTGAGCGTGGACTCCGATCTTTGGGTGTTGCTAGACAGGAAATACCCGAGAAAAATAAAGATAGTCCTGGTGCACCATGGCAATTTGTTGGTCTGCTACCGCTGTTTGATCCTCCCAGGCATGACAGTGCTGAAACCATCACAAGAGCTCTGAACCTTGGAGTGAATGTTAAGATGATTACTGGGGATCAACTTGCCATTGCCAAGGAAACTGGCCGAAGGCTTGGGATGGGAACAAACATGTACCCTTCATCTTCTTTGCTTGGACAAAGCAAGGATGCTTCCATTTCAGCTCTTCCAGTAGATGAGTTGATTGAAAAAGCTGATGGATTTGCTGGAGTATTTCCTGAACACAAATATGAAATCGTTAAGAGACTGCAGGAGAGGAAGCATATATGCGGAATGACAGGTGATGGTGTCAATGATGCCCCTGCATTGAAGAAAGCAGATATTGGAATTGCCGTCGCCGACGCTACAGATGCTGCTAGGAGTGCTTCTGACATTGTCCTCACTGAACCTGGTCTGAGTGTTATTATCAGTGCAGTGCTCACCAGTAGAGCAATTTTCCAAAGGATGAAGAACTATACTATATATGCTGTGTCAATCACCATTCGTATTGTGTTTGGTTTCATGTTCATCGCATTGATTTGGAAGTTTGATTTTGCACCCTTTATGGTGTTGATTATTGCCATACTAAATGACGGTACCATCATGACAATATCCAAGGACAGAGTGAAACCATCCCCACTACCCGATAGCTGGAAACTGAGGGAGATATTTGCTACTGGTGTTGTGCTTGGTAGTTACATGGCACTAATGACAGTAGTATTTTTCTGGATTATGAAGGACACTGACTTTTTCTCGGACAAGTTTGGTGTGAGGCCTCTGAGACACAGCCCTGAAGAAATGATGGCAGCCCTATACCTACAAGTCAGTATTATAAGCCAGGCCCTAATTTTTGTGACTAGGTCCCGCAGCTGGTCCTATGTTGAGAGACCTGGCCTTCTCCTTCTCAGTGCTTTCTTGATTGCTCAACTGGTGGCAACTTTTCTAGCAGTGTATGCAAATTGGGGCTTTGCAAGAATAAAGGGAATGGGATGGGGTTGGGCTGGTGTAATCTGGCTCTACAGTTTAGTGACATATATTCCCCTTGATTTACTGAAATTTGCAATCCGCTATGTTCTGAGTGGAAAAGCTTGGGATAATCTCTTGGAGAACAAGACTGCGTTCACTACAAAGAAAGATTATGGCAAAGAAGAGAGGGAAGCACAATGGGCTGCTGCACAGAGGACTCTTCATGGTCTTCAGCCACCGGAAACAACCAACCTTTTCAACGACAAGAACAGTTATAGGGAGCTTTCAGAGATTGCTGAGCAAGCAAAAAGACGTGCTGAGGTTGCAAGGCTCAGGGAGCTTCACACTCTAAAGGGTCATGTTGAGTCAGTGGTGAAGCTGAAGGGGCTTGACATTGACACAATCCAGCAGCATTACACTGTTTGA 2919 0.4556 MERSSSSRESTSGGSAYCVPSKMGGISLEEIKNENVDLERIPVEEVFEQLKCSRAGLSSDEGANRLQVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLLINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWTEQDAAILVPGDIISIKLGDIIPADARLLEGDALSVDQSALTGESLPVTKNPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGILIELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKLDSDPNKLTVDRTLIEVFTKGIEKEYVILLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILNLCNCKEDVRKKAHAVIDKFAERGLRSLGVARQEIPEKNKDSPGAPWQFVGLLPLFDPPRHDSAETITRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQSKDASISALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLGSYMALMTVVFFWIMKDTDFFSDKFGVRPLRHSPEEMMAALYLQVSIISQALIFVTRSRSWSYVERPGLLLLSAFLIAQLVATFLAVYANWGFARIKGMGWGWAGVIWLYSLVTYIPLDLLKFAIRYVLSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETTNLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV* 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1280 972 Pfam E1-E2 ATPase 153 330 - -
Aev08g1280 972 SUPERFAMILY Calcium ATPase, transmembrane domain M 36 868 IPR023298 -
Aev08g1280 972 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 56 827 IPR006534 GO:0008553|GO:0016021|GO:0120029
Aev08g1280 972 CDD P-type_ATPase_H 56 862 IPR006534 GO:0008553|GO:0016021|GO:0120029
Aev08g1280 972 SUPERFAMILY Calcium ATPase, transduction domain A 154 251 IPR008250 -
Aev08g1280 972 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 584 699 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aev08g1280 972 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 123 354 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aev08g1280 972 PRINTS H+-transporting ATPase (proton pump) signature 781 802 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aev08g1280 972 PRINTS H+-transporting ATPase (proton pump) signature 609 625 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aev08g1280 972 PRINTS H+-transporting ATPase (proton pump) signature 640 665 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aev08g1280 972 PRINTS H+-transporting ATPase (proton pump) signature 466 484 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aev08g1280 972 PRINTS H+-transporting ATPase (proton pump) signature 581 597 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aev08g1280 972 Coils Coil 923 943 - -
Aev08g1280 972 Pfam haloacid dehalogenase-like hydrolase 444 623 - -
Aev08g1280 972 PRINTS P-type cation-transporting ATPase superfamily signature 526 536 - -
Aev08g1280 972 PRINTS P-type cation-transporting ATPase superfamily signature 632 644 - -
Aev08g1280 972 PRINTS P-type cation-transporting ATPase superfamily signature 609 628 - -
Aev08g1280 972 PRINTS P-type cation-transporting ATPase superfamily signature 201 215 - -
Aev08g1280 972 PRINTS P-type cation-transporting ATPase superfamily signature 504 515 - -
Aev08g1280 972 Gene3D - 348 646 IPR023214 -
Aev08g1280 972 PANTHER CALCIUM-TRANSPORTING ATPASE 23 952 - -
Aev08g1280 972 Gene3D - 116 836 - -
Aev08g1280 972 Gene3D - 921 972 - -
Aev08g1280 972 Pfam Cation transporter/ATPase, N-terminus 41 103 IPR004014 -
Aev08g1280 972 PANTHER PLASMA MEMBRANE ATPASE 23 952 - -
Aev08g1280 972 SMART Cation_ATPase_N_a_2 37 109 IPR004014 -
Aev08g1280 972 Gene3D - 362 509 IPR023299 GO:0000166
Aev08g1280 972 Gene3D - 154 238 - -
Aev08g1280 972 SUPERFAMILY HAD-like 435 656 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1280 Aev-Chr8 8043035 8050533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1280 27 972 Primary Pumps ATPases AT3G42640 83.527 0.0 1614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1280 K01535 - gmx:100785442 1748.79