Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1277 ATGGATGAATATACCAGTAAAAGAGCTATTGATGGGGTGGTAGTCCCTAGAAAGGGGATGAACCATTTGTTTAGAGATACTGCTAATACGAGAGATCGAAATGGTCAAGTATGCAGCCGCGTTGGTTGCAGCAGTAAAGTCAACTCTCCTAAGGGTGCTCAAATAGGATCTTCTGAGAAGGGTAAATCTTTGAGAACTGCTATTCGTTCTGCTCCTAATGGCAAGGAAGCAATTGGGAATTCCTCCAGAACTTTCTCAGGGAACGCTAATCCAGGAAAACCCCTCATAAAGCCTCGGAAAACATTGTCCTCTCGGTTGGAGACAGATTCATCTGAAACTAGTAGTGTACAGGATGAACCCGAAGTTTCAAATCTTGCCCCTCCGTCTGAAATCAGTCAGAGAGGGCTTCAAGCAGTAGTTGAAAGTGCTGAGTCTAGCAATGTCACGCAGATGGAAGTAGGGAGCTCTGGTGTAGCATCTAACACAAGGTCTCGAAGGAACTTCCATCCGAAGCCTGGATTGCGTGGTCAAGAAATTAAAAGCATTGGTCCAATGACACGTGCTGCTACCAACAAGTATGGGTTGAGAAACTTGAGATGCAACTCTATATCTGATGTCATCCCTGCTAGTGGCTGTTCACCTTCGGAATCAACCGTCAACAGAAGGAAAGATGTGATGAAAAAGAGAAATTGTGAAGGGGAAGGTAGTTCCTCTGCTAGAGGGAAGAAGATGAGTGGATCTTCATTTGAAGGACGGAATCCTGGTTCCAGAAATGGCATATCCATATCTGATACGAGAAGATCAAGAAATACTCCACCCCACAGGGACAGGCCAGACAACAACAATAACAACAACAACAATAGCGCAACTTCAGTTAGAACACGAAGACCAATTAGTGGTCATGCAAGGGGAAGGCCTTCTAGCCAAGGAAATGCTAATCCTGTGGCATCCAATGAGTCCCTTGTCATGATACCTCCTATGCCTCGTTTTGGTGATTTTAATGCTCCTGGTGTCTCCCACCATTCTTCTGTGGACGCTCCTTTAAGTAGTCTGAGCACTTATAATAGACTTGGTTCCAGCAGTGAGGAACTGTTTGGTGTTATGCCTGTGTCTCCTACAGAATACAGCATCACTCGTTCTCTAATGAATCGGGATAGTTTTCGGCGGCGCTACAACATGGATGGAATTGCAGAGGTTTTGTTGGCACTTGAGAGGATTGAACAAGATGTTGAGCTAACACATGAGCAAATCCTCTTACTGGAGTCCAACTTGCTCCTCACTGGACTGAACTTCTATGATCAGCATAGAGACATGCGGTTGGACATTGATAACATGTCATATGAGGAACTATTAGCTCTGGAAGAGAGGATGGGTACTGTGAGCACAGCTGTATCAGAGGAAGCACTATCTGAATGCCTAAAGAGAAGTTTCTATCAATCTTCATCCTCAGATGATGCAACCGAAAGCTGCAATGGGAACAAGGATGATACCAAATGCAGCATTTGCCAGGAGGAATACATGGCTGCAGATGAAGTGGGAAGTCTGCGATGTGAGCATATGTATCACACGGCTTGCATTCAGCAGTGGCTGAAGCTTAAGAACTGGTGCCCTATTTGCAAAGCATCAGTGGCACAGTCAAAGCCTTGTTCTTCATCCAATTCCAATTGA 1668 0.4502 MDEYTSKRAIDGVVVPRKGMNHLFRDTANTRDRNGQVCSRVGCSSKVNSPKGAQIGSSEKGKSLRTAIRSAPNGKEAIGNSSRTFSGNANPGKPLIKPRKTLSSRLETDSSETSSVQDEPEVSNLAPPSEISQRGLQAVVESAESSNVTQMEVGSSGVASNTRSRRNFHPKPGLRGQEIKSIGPMTRAATNKYGLRNLRCNSISDVIPASGCSPSESTVNRRKDVMKKRNCEGEGSSSARGKKMSGSSFEGRNPGSRNGISISDTRRSRNTPPHRDRPDNNNNNNNNSATSVRTRRPISGHARGRPSSQGNANPVASNESLVMIPPMPRFGDFNAPGVSHHSSVDAPLSSLSTYNRLGSSSEELFGVMPVSPTEYSITRSLMNRDSFRRRYNMDGIAEVLLALERIEQDVELTHEQILLLESNLLLTGLNFYDQHRDMRLDIDNMSYEELLALEERMGTVSTAVSEEALSECLKRSFYQSSSSDDATESCNGNKDDTKCSICQEEYMAADEVGSLRCEHMYHTACIQQWLKLKNWCPICKASVAQSKPCSSSNSN* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1277 555 MobiDBLite consensus disorder prediction 205 317 - -
Aev08g1277 555 Coils Coil 403 423 - -
Aev08g1277 555 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 1 544 IPR045191 GO:0061630
Aev08g1277 555 MobiDBLite consensus disorder prediction 45 64 - -
Aev08g1277 555 MobiDBLite consensus disorder prediction 45 178 - -
Aev08g1277 555 MobiDBLite consensus disorder prediction 107 167 - -
Aev08g1277 555 MobiDBLite consensus disorder prediction 277 295 - -
Aev08g1277 555 SMART ring_2 499 539 IPR001841 -
Aev08g1277 555 MobiDBLite consensus disorder prediction 240 267 - -
Aev08g1277 555 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 458 546 IPR013083 -
Aev08g1277 555 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL44-RELATED 1 544 - -
Aev08g1277 555 MobiDBLite consensus disorder prediction 75 89 - -
Aev08g1277 555 MobiDBLite consensus disorder prediction 220 236 - -
Aev08g1277 555 CDD RING-H2_PA-TM-RING 499 540 - -
Aev08g1277 555 Pfam Ring finger domain 498 540 IPR001841 -
Aev08g1277 555 ProSiteProfiles Zinc finger RING-type profile. 499 540 IPR001841 -
Aev08g1277 555 MobiDBLite consensus disorder prediction 205 219 - -
Aev08g1277 555 SUPERFAMILY RING/U-box 494 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1277 Aev-Chr8 8021795 8024052 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1277 377 540 C3H Transcription Factor Family AT2G15530 42.683 9.70e-34 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1277 - - gmx:100787213 800.045