Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1271 ATGGAGCTGGAGTTCTCCAAGGAAACCTTCAGCGTGTCTTCCAACTCTTCGTTCATGTCCTCCGCTATTACCGGCGACGGAAGCGTCTCCAACGGCAAGCTCGGATCCTCGATCTTCCTCGCTCCAGCCGCGACACCTGCGGTTTCCGGCGGAAAGCCGCCGCTGTCGTCTGCTCCGACCAAGAAGCGGTGCTACGACCACCGCGAGCACTCCGACGACGTCTCCGGGAAGCACTCCGGTTCCTCAAGCAAGTGCCACTGCAGCAAGCGAAGGAAAAATCGGGTGAAGAAGACGATAAGAGTGCCGGCGATAAGTTCGAAGATCGCTGATATACCGCCGGATGAGTATTCATGGAGGAAGTACGGTCAGAAACCGATCAAGGGTTCACCGTATCCGAGGGGCTACTATAAGTGCAGTACAGTGAGGGGATGCCCAGCGAGGAAACACGTGGAACGTGCACCGGATGAGCCTACGATGCTGATCGTGACGTACGAGGGGGAGCACCGTCACACCATTCAGACCGCGATGCAGGATAACATTTCCGGAGGAGTGGGTTTGGTATTCGAGTCAACGTAA 576 0.566 MELEFSKETFSVSSNSSFMSSAITGDGSVSNGKLGSSIFLAPAATPAVSGGKPPLSSAPTKKRCYDHREHSDDVSGKHSGSSSKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDEPTMLIVTYEGEHRHTIQTAMQDNISGGVGLVFEST* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1271 191 Gene3D WRKY domain 100 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev08g1271 191 Pfam WRKY DNA -binding domain 114 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev08g1271 191 MobiDBLite consensus disorder prediction 61 79 - -
Aev08g1271 191 ProSiteProfiles WRKY domain profile. 107 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev08g1271 191 PANTHER WRKY TRANSCRIPTION FACTOR 17-RELATED 3 190 - -
Aev08g1271 191 Pfam Plant zinc cluster domain 61 110 IPR018872 -
Aev08g1271 191 SMART WRKY_cls 112 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev08g1271 191 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 3 190 IPR044810 GO:0003700
Aev08g1271 191 SUPERFAMILY WRKY DNA-binding domain 110 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev08g1271 191 MobiDBLite consensus disorder prediction 46 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1271 Aev-Chr8 7978788 7979976 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1271 3 190 WRKY Transcription Factor Family AT2G24570 73.298 5.94e-83 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev08g1271 WRKY 8.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1271 - - gmx:100127394 306.99