Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1250 ATGGATCCACCAAAGAAATCTAACAAGATCAAAGAAATTGTGAGGCTTCAACAGATTCTCAAGAAATGGAGAAGGATTGCAAACTCTTCATCAAAAACAATAAGAGGTAACAGCAGCAGCAGCAGTACAATGAAGAGCATTAACTTTCTGAAAAGAACACTCTCTTTGTCGGAGCGCGATGGAGGAGGATCAAGCAGCAATAATGTGGTTCCTAAAGGGTATCTAGCAGTTTGTGTTGGCATAGAGCTAAAGAGGTTTGTTATACCAACTGTGTATCTTGGTCATCAAGCCTTTCACATTTTGCTGAGAGAAGCTGAGGAAGAATTCGGGTTTGAACAGACTGGTGTTCTGAGGATTCCTTGTGAAGTATCTGTTTTTGAGAGTATCTTGAAGATTGTGGAGGAAAAGGGTAAGTTTTCTGATAAGAAATGCCAATTCAGTGTTGAAAAGATGATTGGATACTGCTCCTTGAATCAGCTTGGTTATTCTCATCATCATCCTCAGAGTCCTATGTGTAGATAG 522 0.3985 MDPPKKSNKIKEIVRLQQILKKWRRIANSSSKTIRGNSSSSSTMKSINFLKRTLSLSERDGGGSSSNNVVPKGYLAVCVGIELKRFVIPTVYLGHQAFHILLREAEEEFGFEQTGVLRIPCEVSVFESILKIVEEKGKFSDKKCQFSVEKMIGYCSLNQLGYSHHHPQSPMCR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1250 173 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 173 IPR003676 GO:0009733
Aev08g1250 173 PANTHER OSJNBA0060N03.10 PROTEIN 6 173 - -
Aev08g1250 173 Pfam Auxin responsive protein 22 132 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1250 Aev-Chr8 7861038 7861559 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1250 5 173 Calmodulin-binding Proteins AT2G24400 51.323 8.15e-54 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1250 K14488 - gmx:100500385 258.07