Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1247 ATGTTTTCTCTTCTTCTCTCCGGCGGCGTTCTGGCTGCGCCTCAATCCCTTCCACCGCCGGCGGTGTTCCCCAACTCCGGCGACCTCAAACGAATCATGGCCACCACGGACCTCGACCTCGACTACGATTGGTGGATTTTCGGAGTCGAGATATCCAACGACGTCAAGCCCGCCCACGACGCTTTCCCCGCCGCCGGCGCTTTCCAGAATCCGAATGCTTTGAGTTCATTTTCAACGTGTGGCGGAGTCGCAGTAGCAGATACAAATAACATCCTCTGTTCCCAAAACATCACTACTCCCACCTCCAAGCATCATCCCACCGTTTCTGTTACTCTGGATTCTCAGTCATCAATTTGCGGCACCGTTGGGAGCCCAGTGTCTGCTAATAAACCAGCAAAGGAGAGAGAGAATGATCATCAAGCGAAAGGAGCTTCGAGTGGTTCCTCTGACCCCTCTGATGAGGATGATGAAGCAGGTCCTTGGGAACAGAGCACAAATCCTATTGATATGAAGCGCCTTAGAAGGAAGGTTTCCAATCGTGAGTCTGCAAGGAGGTCAAGAAGAAGGAAACAAGCTCATTTGGCAGACCTTGAGATGCAGGTTGAAAAACTGAAACACGAAAATGCAACCTTATACAAGCAGTTTACAGATGCTAGTCAACAATTTCGTGAGGCAGATACTAACAACCGAGTGCTAAAATCAGGCGTTGAAGCTTTGAGAGCTAAGGTGAAATTAGCTGAGGATATGGTCACTAGGAGCTCTTTCACCACGTTAAACAACCACCTTCTTCAGCCTCCGTGCCAACTGAGCACACCACCACCACCACAACTCAACGCCACGACTGGCTTGCGCCGCGCGGCGCATGTCTCGCCGACTATCACTATCCAAGGAAACGATGCCTCGTATGGTGGTGGTGGTGTCCCTGTTGGTGGACACAATAATTCAGCTCATCTTGGCCTTGAAAACTTGGATATACCTTACAATAATGATGTCAATAATGGGATCATTAACGATGCTCTAAGCTCTATGAGTATCTGGCAGTAG 1044 0.4971 MFSLLLSGGVLAAPQSLPPPAVFPNSGDLKRIMATTDLDLDYDWWIFGVEISNDVKPAHDAFPAAGAFQNPNALSSFSTCGGVAVADTNNILCSQNITTPTSKHHPTVSVTLDSQSSICGTVGSPVSANKPAKERENDHQAKGASSGSSDPSDEDDEAGPWEQSTNPIDMKRLRRKVSNRESARRSRRRKQAHLADLEMQVEKLKHENATLYKQFTDASQQFREADTNNRVLKSGVEALRAKVKLAEDMVTRSSFTTLNNHLLQPPCQLSTPPPPQLNATTGLRRAAHVSPTITIQGNDASYGGGGVPVGGHNNSAHLGLENLDIPYNNDVNNGIINDALSSMSIWQ* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1247 347 CDD bZIP_plant_GBF1 172 223 IPR045314 GO:0003700|GO:0006355
Aev08g1247 347 Pfam bZIP transcription factor 170 215 IPR004827 GO:0003700|GO:0006355
Aev08g1247 347 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 174 189 IPR004827 GO:0003700|GO:0006355
Aev08g1247 347 Coils Coil 180 214 - -
Aev08g1247 347 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 169 232 IPR004827 GO:0003700|GO:0006355
Aev08g1247 347 PANTHER BASIC LEUCINE ZIPPER 63 36 346 - -
Aev08g1247 347 MobiDBLite consensus disorder prediction 121 193 - -
Aev08g1247 347 Gene3D - 170 226 - -
Aev08g1247 347 PANTHER BZIP TRANSCRIPTION FACTOR 36 346 - -
Aev08g1247 347 SUPERFAMILY Leucine zipper domain 171 221 IPR046347 GO:0003700|GO:0006355
Aev08g1247 347 SMART brlzneu 167 231 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1247 Aev-Chr8 7838897 7843604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1247 113 319 bZIP Transcription Factor Family AT5G24800 49.282 6.70e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aev08g1247 bZIP_1 4.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1247 K25784 - gmx:780555 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1247 08 7838897 7843604 Aev08g1247 08 7838897 7843604 ECH