Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1244 ATGCAAAAAGAAAAGGAAGCAGGAAAGAGCATGAACAAGGAGGGGAATAATAAAGAAATGGAAGGTGGAAAAGAGGAAACCCTACCACCAGGCTTTCGGTTTCATCCTACTGATGAAGAACTCATCACTTGCTATCTCATCAACAAGATTTCCGATTCCAATTTTACAGCCAGAGCTATCACTGATGTTGATCTCAACAAATCTGAGCCATGGGACCTCCCAGGGAAAGCAAAGATGGGAGAAAAAGAGTGGTACTTCTTCAGCCTAAGAGATCGAAAGTACCCAACAGGGGTGAGAACAAACAGAGCAACAAACACAGGGTACTGGAAGACGACAGGGAAAGACAAGGAGATCCTAAACAGTGTGACATCGGAGTTGGTTGGGATGAAGAAGACTTTGGTTTTCTACAAAGGAAGAGCTCCGAGGGGAGAGAAGAGCAACTGGGTGATGCATGAGTATCGCATTCACTCTAAGTCCACCTTCCGAACTACCAAGCAGGATGAATGGGTGGTATGCCGAGTGTTCCAGAAGAGTGGTGGAGCAAAGAAGTACCCATCCTCGAACCATGCAAGAGCAGTGAACCCTTTCAGCCTCGAAATAGGTCCAAACATGATGCCACCACCAATCATGCAACTCGGAGACCCTTCTCCCAATAGCCACTTCCTCTATGGTAGAAACTACATGATGTCCAATGCTGACCTTGCTGAAGTAGCTAGGGCTCTTAGAGCTGGATCCACCAGCACCACTCCTCTCAACCTACCAATGCAAGCCCCATTGAACTACCCGGTAACCGCCTCCGGTGCCGGATTCACCATTTCAGGGCTCAATTTGAATCTCGGAGGAGGAGTCACGGCACCGCAATCTATTTTAAGGCCAATGCAGCCACTGCCACCGCCGCCGCCGCCGCAGCATGCTCAGACAATGCATCATGTTCATGATGTGAGTCCTAATAATAACATGATGATTGGTGCAGAGAATAATAATTATGTCACTGAAATGAGTAACACAAACCCTCATGGCAATAGATTTTTGGGCATGGATCATTGCATGGATCTAGATAATTACTGGCCTTCCTACTAA 1080 0.4704 MQKEKEAGKSMNKEGNNKEMEGGKEETLPPGFRFHPTDEELITCYLINKISDSNFTARAITDVDLNKSEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSVTSELVGMKKTLVFYKGRAPRGEKSNWVMHEYRIHSKSTFRTTKQDEWVVCRVFQKSGGAKKYPSSNHARAVNPFSLEIGPNMMPPPIMQLGDPSPNSHFLYGRNYMMSNADLAEVARALRAGSTSTTPLNLPMQAPLNYPVTASGAGFTISGLNLNLGGGVTAPQSILRPMQPLPPPPPPQHAQTMHHVHDVSPNNNMMIGAENNNYVTEMSNTNPHGNRFLGMDHCMDLDNYWPSY* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1244 359 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 356 - -
Aev08g1244 359 SUPERFAMILY NAC domain 24 177 IPR036093 GO:0003677|GO:0006355
Aev08g1244 359 ProSiteProfiles NAC domain profile. 28 177 IPR003441 GO:0003677|GO:0006355
Aev08g1244 359 MobiDBLite consensus disorder prediction 1 32 - -
Aev08g1244 359 Pfam No apical meristem (NAM) protein 29 155 IPR003441 GO:0003677|GO:0006355
Aev08g1244 359 Gene3D NAC domain 37 180 IPR036093 GO:0003677|GO:0006355
Aev08g1244 359 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 22 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1244 Aev-Chr8 7823468 7825969 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1244 14 359 NAC Transcription Factor Family AT2G24430 50.815 3.20e-113 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev08g1244 NAM 5.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1244 - - gmx:100804931 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1244 08 7823468 7825969 Aev08g1244 08 7823468 7825969 ECH