Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1217 ATGGAGCAGAGCGAAACGGCTTTGAATTTAGCTCCGCAGAAATTGGCGAGGCAGTTGGATTTCACGGCGGAGTGTAGCAAAGGTCCGTCGCGCCTGAAACTTCCACCGCCGCCTCCGACGCCGCCGCAGCAGTCGCCGTCGCAATTGCAATTGACTCTGCATCCGCCTGGGCAGCAGCAGCAACAGCCGCAGCCGTGGTTGTATTCGCGGCAGCAGAGAGCGGCGCGGCCGCAGCTGGTTTCGCCGATTCGGAGAATTCCGCATCCTGTGCAGAAGCTCCCGGTTAAGGCGTTGCAAGTATCGAAGCAAGAGTCTCCTGTATCACGACCGCGGTATAATGTGGAATTAAAAGACAGCACTCCAAAGAAACCAAAACAATGTAATTGCAAAAATTCTCGATGTCTCAAATTGTACTGTGAATGCTTTGCAGCTGGGATTTATTGCGATGGTTGCAATTGTGCGAATTGTCATAATAATGTGGATAATGAAGCTGCTAGACAGGAGGCTGTTGGAATAACATTAGAACGAAATCCAAATGCTTTCAGACCAAAAATTGCTAACAGCCCACAAGAACCTCTAGATTCCAAGGTAGATGTGTCTGAAATTCAGGTAGTTGGAAAGCACAATAAAGGATGTCACTGCAAGAAATCAGGTTGCCTTAAGAAGTATTGTGAATGCTTCCAAGCCAATATCCTCTGCTCTGAAAATTGCAAATGCATGGACTGCAAGAATTATGAAGGAAGTGATGAAAGAAGAGCAATGTTTCCTGAAGAGTACAATCTAGTTCACATCAAACATGCAGCTAATGCTGCCATCAGTGGAGCAGTTGGATCCTCCGGCTACAAGACCTTCATAACACCCAAGAAGAGAAAAATTCAGGAAATATTTTCTGGCAGATCAACAATAGATCAAACAGCTAACCAGACCTGTCAATTTAAACAGGAAGTTGATCCAATTGTTTCATCACGTACATCTTTGCCAGCATCGTTTGTTGTAGACACCACCAACACAAGAATTTCAGGGTCATCAAGTTCTACATACAGGTCGCTATTGGCGGATGTCCTCCAGTCACAGAATGTGAAGAGTCTCTGTTCACTTTTTGTTGTTCTCTCCGGAGTAGCTGCAAAGAGAAATGCAGAAATGAATGGCAAAGATGACCAGAAAATAGAAGCTGGGAATTTTGAAGCTTCTATTGCTTCATCAGCTCAACTGTTTCAGCACAGTGGAGATTCCCACAAGCCTGTATGTGATGATTGTAAGAATGAAGCAGATAGAGTTGATACTGACAATTACAATAGGGCATTGTCACCAGAAACACTAGCATTGATGTGTGATGAACAAGATGAGGTATTTTTGGACGATGGTACTGCAAATGAAGTGGCATGCAACAGCAATTGTCAAAACCCGATTCAAAGGTCATCCACTTCTGGTGGATGCCCTGATGTGTATGGAGAGCAGGAAAGGGTTGTCCTGACAAAGTTCTGGGATGTTCTTCGCGGACTCATAACTCTCGGGAGCATAAAAGAAACAATGTGCTCTTCATTAGCCAAGAAAGAGGTGGTAAACAAGGAAGAACCTGCATGCAACGACGCTACTGGTGTTGAAGCTGATAGAAGGAGCGAGAAGGAAACTCAGAGCAACTGCGCCGCGAAGTTCCTCGACTCATCGGGTGTTAAAATATCTCAGACGAAGTACGCAATGAGTAATGGACATGATGATGTTGATCTGTCATTAAGGGTTGCCTGCTGTCAATTGGACCAAAAGGGGTCGTAA 1773 0.4523 MEQSETALNLAPQKLARQLDFTAECSKGPSRLKLPPPPPTPPQQSPSQLQLTLHPPGQQQQQPQPWLYSRQQRAARPQLVSPIRRIPHPVQKLPVKALQVSKQESPVSRPRYNVELKDSTPKKPKQCNCKNSRCLKLYCECFAAGIYCDGCNCANCHNNVDNEAARQEAVGITLERNPNAFRPKIANSPQEPLDSKVDVSEIQVVGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNYEGSDERRAMFPEEYNLVHIKHAANAAISGAVGSSGYKTFITPKKRKIQEIFSGRSTIDQTANQTCQFKQEVDPIVSSRTSLPASFVVDTTNTRISGSSSSTYRSLLADVLQSQNVKSLCSLFVVLSGVAAKRNAEMNGKDDQKIEAGNFEASIASSAQLFQHSGDSHKPVCDDCKNEADRVDTDNYNRALSPETLALMCDEQDEVFLDDGTANEVACNSNCQNPIQRSSTSGGCPDVYGEQERVVLTKFWDVLRGLITLGSIKETMCSSLAKKEVVNKEEPACNDATGVEADRRSEKETQSNCAAKFLDSSGVKISQTKYAMSNGHDDVDLSLRVACCQLDQKGS* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1217 590 ProSiteProfiles CRC domain profile. 123 247 IPR005172 -
Aev08g1217 590 SMART CXC_2 122 162 IPR033467 -
Aev08g1217 590 SMART CXC_2 207 248 IPR033467 -
Aev08g1217 590 MobiDBLite consensus disorder prediction 31 45 - -
Aev08g1217 590 MobiDBLite consensus disorder prediction 46 73 - -
Aev08g1217 590 PANTHER TESMIN/TSO1-RELATED 1 555 IPR028307 -
Aev08g1217 590 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 125 159 IPR005172 -
Aev08g1217 590 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 210 245 IPR005172 -
Aev08g1217 590 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 1 555 - -
Aev08g1217 590 MobiDBLite consensus disorder prediction 22 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1217 Aev-Chr8 7631424 7635762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1217 13 520 CPP Transcription Factor Family AT4G29000 45.554 1.21e-131 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Aev08g1217 TCR 3.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1217 - K21776 gmx:100811459 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1217 08 7631424 7635762 Aev08g1217 08 7631424 7635762 ECH