Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1208 ATGGAGAGGGTTGTAGGAGGAAAGTATAAGCTGGGTAAGAAAATCGGGAGCGGCTCCTTCGGTGAAATTTTTATTGCAACAAATATCGAGACATCTGAGATTGTGGCTGTCAAGATGGAGAACAAGAAAACAAAACATCCACAACTACTGTACGAGGCTAAGCTGTACAATCTTCTCCAAGGAGAAACTGGTGTTCCAAGTATGAAATGGTGTGGCACTGATGGAGACAATAATGTTCTGGTTATTGATCTTCTGGGACCAAGTCTCGAGGACCTTTTTGTCTATTGCGGGAGGAAATTTTCTCTAAAAACAGTTTTGATGTTGGCTGATCAGATGCTTACAAAAATAGAGTATTTGCATTCCAAGGGATTTTTGCATAGAGACATCAAACCAGATAACTTCCTTATGGGTCTTGGAAGGAGAGCAAGCCAGGTTTATATTATTGATTTTGGACTAGCAAAAAGATTTAAGGACCCTAGCACAAACAAGCATATCCCTTACAGAGAAAACAAAAACTTAACTGGGACTGCACGTTATGCGAGTTGCAATACTCACATAGGAATTGAGCAAAGTCGTCGGGATGATTTGGAGTCTCTTGGCTATGTTCTTATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTCTGAAAGCTGTCACCAAAAAGGAAAAATATGACAAGATTTGTGAGAAGAAGTTATCAACTCCTATTGAGATGCTATGCAAGTCATATCCCGTGGAGTTTGCTTCTTACTTTCATTATTGCCACTCCTTGACGTTTGATCAACAACCAGATTATGGATTCTTGAAGCGCCTGTTTCAGGATTTGTTCACTCGTGAGGGATATGATTCTGACTATTTGTTTGACTGGACCATCCTGAAGTATCAGCAGGCGCAACAGACAAAGAGACAAAATCAATCATCTGCTTCGGCTGCCGTGCCTAGCAGTCTAGCTGTTGCGCCTAGCAATCTAGAATCAGGGGCTGCTGTCGATAAGCGTAAAGGAGTCAACGATTCAGCTCATAACCATATTACTGTAACGAAACTGTTAGCCAATCTTGATCGACCAAGTGTACAAGTGCAGCCTAAACCATCCAATGTTCAGAATCAGACCGAGAAACACAATGCGAACAATGGTCCATCAACTTCATCTGCTTTGCCCAGATCCTCAAAAGAAAATGTCTCAAAACCAGAAAGGCCAGTAGGAACCTCAAACATTGGTCGTGTATTTGGGAGCAATTCCCGTACTTCAAGCAGTTGGATTCCTTCACTTCGCCGAATTTCTTCAGCCAAATAG 1296 0.4198 MERVVGGKYKLGKKIGSGSFGEIFIATNIETSEIVAVKMENKKTKHPQLLYEAKLYNLLQGETGVPSMKWCGTDGDNNVLVIDLLGPSLEDLFVYCGRKFSLKTVLMLADQMLTKIEYLHSKGFLHRDIKPDNFLMGLGRRASQVYIIDFGLAKRFKDPSTNKHIPYRENKNLTGTARYASCNTHIGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAVTKKEKYDKICEKKLSTPIEMLCKSYPVEFASYFHYCHSLTFDQQPDYGFLKRLFQDLFTREGYDSDYLFDWTILKYQQAQQTKRQNQSSASAAVPSSLAVAPSNLESGAAVDKRKGVNDSAHNHITVTKLLANLDRPSVQVQPKPSNVQNQTEKHNANNGPSTSSALPRSSKENVSKPERPVGTSNIGRVFGSNSRTSSSWIPSLRRISSAK* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1208 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Aev08g1208 431 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 416 - -
Aev08g1208 431 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Aev08g1208 431 SMART serkin_6 9 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g1208 431 PANTHER CASEIN KINASE-RELATED 1 416 - -
Aev08g1208 431 Pfam Protein kinase domain 9 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g1208 431 Gene3D Transferase(Phosphotransferase) domain 1 1 334 - -
Aev08g1208 431 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g1208 431 MobiDBLite consensus disorder prediction 353 431 - -
Aev08g1208 431 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1208 Aev-Chr8 7566752 7570599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1208 9 233 EF-hand Containing Proteins AT2G35890 29.362 3.40e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Aev08g1208 Pkinase 4.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1208 K08960 K08959 gmx:100792736 714.146