Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1203 ATGTGCAGTATTATCTTCAAGAACCATATGTTAGTTTTCATGATGGTGATTCTTCTTCTTTCTCTCCTCTTCTATGTTGAAGGCCAAATCAGTGATCAACAACAAAACACGCCAGATTATCCCCAAACTGTGCATCCAAGCAAGGGGCTTGTGATATCAGTCCTCACCATAATGTTTGCCATAACATTCCTCTTACTGGCCTATGTAAAATTCTGCAGAATTGGCCCTCTTGAGGCTATGAACCAAAACCACAACACCACCAACCTCCAAAACTTTCGTGGACTAACTCGATCAGGGTCAAGATTTTCAGGGATAAACAGAGAGGTAATTGATAAACTCCCATTCTTCAAATTCTCCTCCCTTAAAGGGTCCAAAGAAGGCCTAGAATGCACTGTTTGCTTGTCCAAATTCGAGGACTCGGAGACTCTAAGGTTGCTCCCAAAGTGCCAGCACGCTTTCCACATGAGTTGCATTGACAAGTGGCTAGAAAGCCACTCCACGTGTCCTCTTTGCAGGTACAGGGTTGAACAAGGGGACATCAAGAACTTCAACTTCTCACTCAGCTCAAGGTTCCTAAGAGTCCCTTCGAACCTAACAGAGGACCCAAACGTTGAAATCTATGTCCAGAGGGAGCCATCAAATCGAGGGTCATCGAGATTCAGCATTGGGAGTGGATTATGGGAAGTGGGCAAGAGCAAGAAACAAGAACAACCACTCATTGATGATCAAGAAGAAGAAGGTGATCATAACAGTGGTACAGGCATAAACACAAACACAAAGTGGGCACAAGAACATGTTCACCACCACAAGCTTAACCACAGAATAGTTATATCTGATGTTGTTACAAGGAGCAGGTGGAGTGATCTCAATTCTTCGGATTTGATATCTTTGAGCTTTGAAATGATGCTTAACGATGTGTCAAGCGCGAGATTCTCTCCTCCTCTGGAATCCAACAACAACAACAATGGTGAGAAGATTCATCATGGTTCTTCTAGTTCCAATAATAATGATGACGAGGAAGAGAATTCATTTACGGCACTGAATAATCCTAATCCTAGTACTGAGAAGAGGTCCATGTCTGAGATTGCCAATGTTCCAAGGTTTATCGCAGGGATGAGAAAACAGAGTAGGGTCAGAGAATATTCTGGTGGGGACAGTGGGAGGAGGGAAGAGAGGTTGTGGAGGATTTGGATGCCCATTGCTCAAAGAACGGTTCAATGGTTTGCAACAAGAGAAATTAGGAATTCACATGATGAAATTGAATTGCAACACAAAACTTTAGTAGGTTCAAATGTTTAA 1299 0.428 MCSIIFKNHMLVFMMVILLLSLLFYVEGQISDQQQNTPDYPQTVHPSKGLVISVLTIMFAITFLLLAYVKFCRIGPLEAMNQNHNTTNLQNFRGLTRSGSRFSGINREVIDKLPFFKFSSLKGSKEGLECTVCLSKFEDSETLRLLPKCQHAFHMSCIDKWLESHSTCPLCRYRVEQGDIKNFNFSLSSRFLRVPSNLTEDPNVEIYVQREPSNRGSSRFSIGSGLWEVGKSKKQEQPLIDDQEEEGDHNSGTGINTNTKWAQEHVHHHKLNHRIVISDVVTRSRWSDLNSSDLISLSFEMMLNDVSSARFSPPLESNNNNNGEKIHHGSSSSNNNDDEEENSFTALNNPNPSTEKRSMSEIANVPRFIAGMRKQSRVREYSGGDSGRREERLWRIWMPIAQRTVQWFATREIRNSHDEIELQHKTLVGSNV* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1203 432 MobiDBLite consensus disorder prediction 312 358 - -
Aev08g1203 432 ProSiteProfiles Zinc finger RING-type profile. 130 172 IPR001841 -
Aev08g1203 432 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 20 419 - -
Aev08g1203 432 SMART ring_2 130 171 IPR001841 -
Aev08g1203 432 CDD RING-H2_EL5_like 129 172 - -
Aev08g1203 432 MobiDBLite consensus disorder prediction 231 257 - -
Aev08g1203 432 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 181 IPR013083 -
Aev08g1203 432 SUPERFAMILY RING/U-box 107 176 - -
Aev08g1203 432 Pfam Ring finger domain 129 172 IPR001841 -
Aev08g1203 432 PANTHER RING-H2 FINGER PROTEIN ATL4J 20 419 - -
Aev08g1203 432 MobiDBLite consensus disorder prediction 234 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1203 Aev-Chr8 7544945 7546243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1203 46 415 C3H Transcription Factor Family AT2G20030 41.270 1.69e-76 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1203 K10664 - gmx:100816668 439.499