Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1197 ATGAGCATTGAGAACAAGAACTCATCATCAGAGACAAAGAAGCGAATTATTAGAGGAGGAGCAGGAGAGTCGTGGTGTAGCAAGCACCCGGTGTACCGTGGAGTACGCAAGAGGAATTGGGGGAAATGGGTTTCCGAAATCCGCGAGCCCAGGAAGAAGTCACGCATATGGCTCGGCACTTTCGCCACCCCCGAGATGGCCGCCAGGGCACACGACGTCGCCGCCCTCACCATCAAGGGCTCCTCCGCCATCCTCAACTTCCCCCACCTCGCTACCTTGCTCCCCCGCCCTGCCTCCCTCTCCCCCCGCGACGTCCAAGCCGCCGCCACTAAAGCCGCCGGGATGGTCCACTTAGATTCACAGTCGTCGTCGTCGTCGTCACCGCCATTGTCGTCATCGTGTGCTACTAGTACTGGTGGCTCGGATGATGATGATGAGTTGAGTGAGATCATCGAGCTTCCGAGGCTGGTGGAAAGCGGCGGTGATGAGTTGATGGAGAAGGAGTTCGTGTTCATGGACTCTCTGGACGGCTACTGGATGTATCAGCCACCATGGTTGGAGATTGCAGGAGAACACCCTGATGATGGGGTTGTAAGTGCTTTTCATAGTTTGCTCTGGAATTATTAA 627 0.5582 MSIENKNSSSETKKRIIRGGAGESWCSKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALTIKGSSAILNFPHLATLLPRPASLSPRDVQAAATKAAGMVHLDSQSSSSSSPPLSSSCATSTGGSDDDDELSEIIELPRLVESGGDELMEKEFVFMDSLDGYWMYQPPWLEIAGEHPDDGVVSAFHSLLWNY* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1197 208 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
Aev08g1197 208 PRINTS Ethylene responsive element binding protein signature 54 70 IPR001471 GO:0003700|GO:0006355
Aev08g1197 208 CDD AP2 32 90 IPR001471 GO:0003700|GO:0006355
Aev08g1197 208 MobiDBLite consensus disorder prediction 111 145 - -
Aev08g1197 208 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 7 187 - -
Aev08g1197 208 SMART rav1_2 31 94 IPR001471 GO:0003700|GO:0006355
Aev08g1197 208 SUPERFAMILY DNA-binding domain 31 89 IPR016177 GO:0003677
Aev08g1197 208 Pfam AP2 domain 30 80 IPR001471 GO:0003700|GO:0006355
Aev08g1197 208 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 7 187 - -
Aev08g1197 208 MobiDBLite consensus disorder prediction 116 141 - -
Aev08g1197 208 Gene3D AP2/ERF domain 31 89 IPR036955 GO:0003700|GO:0006355
Aev08g1197 208 ProSiteProfiles AP2/ERF domain profile. 31 88 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1197 Aev-Chr8 7508159 7508785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1197 2 207 AP2-EREBP Transcription Factor Family AT5G11590 52.055 1.44e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev08g1197 AP2 7.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1197 K09286 - ini:109190911 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1197 08 7508159 7508785 Aev08g1197 08 7508159 7508785 ECH