Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1189 ATGGAAGCACAAGAGTTCTTCCACAGCGCCTTCTGCACACAATTCCCCTCCGACACCACCACCACCACCACCACCACCACCAACGCCTCTAATTCCGACCACTTCATCGTAGAGGAGTTTTTCGACTTCTCCAACGACAACGACGCTGCCCCCGTCATCCCTGACACCACCGCCACCTTCGACTCCCTCACCGGCAACTCCACCGACTCTTCCTCCGCCGCAACCGCCCTCGACAGCGCCAATTCCTCCGCCTCCCACCCCAATTTCCTCACCCCCGACGCCCATTTCGCCAGTGACCTCTCCGTCCCGTACGATGATCTCGCGGAGCTGGAATGGCTGTCCAATTTCACGGAGGAGTCATTTTCGAGCGAGGACCTGCAGAAGATGCAGCTCATAACGGGCATGAAGGCCCGGAACGATGCTGCCTCAGAGGCCCGTGACTTCCAGCCCGAGCCCAACCGAAGCAACCCGGTGCTCAACCCACAGGTGTCGGTCCCGGCCAAGGCCCGCAGCAAGCGGTCACGTGGGCCCCCATGCAACTGGACCTCTCGCCTCCTCGTCCTCTCCCCGACGACGTCGTCCTCCCAGCCCGAGCCCGTTGGGCCCCCCAAGAAGCCAGCTCCGCGGAAGAGGGACACCGGCGACGGAGGGGAGGGCCGGAAGTGCCTGCATTGCGCCACGGACAAGACTCCTCAGTGGAGGACAGGGCCCATGGGCCCTAAGACGCTGTGCAACGCGTGCGGCGTGAGGTACAAGTCGGGCCGGCTGGTCCCGGAGTACAGGCCCGCAGCGAGCCCGACGTTCGTGCTGACGAAGCACTCGAACTCGCACCGCAAAGTGCTGGAGCTGAGGCGCCAGAAGGAGATGGTGCGGGCCCAGCAACAGCATCAGGAGCAGCTGCTGCAGCAGCAGCACCATCATCATCACCACCATCAGAGCATGATGTTCGATGCCTCATCCAACGGCGACGATTACTTGATCCATCACCCCGTGGGCCCCGATTTCGCGCAGCTGATATAG 1020 0.6284 MEAQEFFHSAFCTQFPSDTTTTTTTTTNASNSDHFIVEEFFDFSNDNDAAPVIPDTTATFDSLTGNSTDSSSAATALDSANSSASHPNFLTPDAHFASDLSVPYDDLAELEWLSNFTEESFSSEDLQKMQLITGMKARNDAASEARDFQPEPNRSNPVLNPQVSVPAKARSKRSRGPPCNWTSRLLVLSPTTSSSQPEPVGPPKKPAPRKRDTGDGGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKEMVRAQQQHQEQLLQQQHHHHHHHQSMMFDASSNGDDYLIHHPVGPDFAQLI* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1189 339 MobiDBLite consensus disorder prediction 64 85 - -
Aev08g1189 339 ProSiteProfiles GATA-type zinc finger domain profile. 216 252 IPR000679 GO:0006355|GO:0043565
Aev08g1189 339 Pfam GATA zinc finger 222 255 IPR000679 GO:0006355|GO:0043565
Aev08g1189 339 CDD ZnF_GATA 221 268 IPR000679 GO:0006355|GO:0043565
Aev08g1189 339 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 217 280 - -
Aev08g1189 339 SMART GATA_3 216 266 IPR000679 GO:0006355|GO:0043565
Aev08g1189 339 PANTHER GATA TRANSCRIPTION FACTOR 1 339 - -
Aev08g1189 339 MobiDBLite consensus disorder prediction 204 221 - -
Aev08g1189 339 PIRSF Txn_fac_GATA_plant 3 314 IPR016679 GO:0003677|GO:0005634|GO:0045893
Aev08g1189 339 MobiDBLite consensus disorder prediction 137 221 - -
Aev08g1189 339 Gene3D - 214 305 IPR013088 GO:0006355|GO:0008270
Aev08g1189 339 PANTHER GATA TRANSCRIPTION FACTOR 1 339 - -
Aev08g1189 339 ProSitePatterns GATA-type zinc finger domain. 222 247 IPR000679 GO:0006355|GO:0043565
Aev08g1189 339 MobiDBLite consensus disorder prediction 300 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1189 Aev-Chr8 7450258 7451813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1189 2 339 C2C2-Gata Transcription Factor Family AT5G25830 48.370 7.29e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev08g1189 GATA 3.1e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1189 - - pvy:116140711 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1189 08 7450258 7451813 Aev08g1189 08 7450258 7451813 ECH