Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1187 ATGATGGCGGTGAGTTCGGCGTGCAAGGAAGGGAGCAAGATCGCACTGGATAACGGCAAGTATGTACGGTACACCCCAGAGCAGGTGGAAGCACTGGAGAGGCTCTACCATGATTGCCCCAAACCCAGTTCCCTCCGCCGCCAGCAACTCATCAGAGACTGCCCCATTCTCTCCAACATCGAACCCAAGCAGATCAAAGTTTGGTTCCAGAACCGAAGATGCCGAGAGAAGCAGAGGAAAGAGGCGTCACGGCTGCAAGCTGTAAACAGGAAGCTGACAGCAATGAATAAACTGCTGATGGAGGAAAACGACAGATTGCAGAAGCAGGTCTCACACCTTGTCTATGAGAACACCTTTTTCCGCCAACACACTCACAATGCGACGCTGGCGACGACGGACACGAGCTGTGAGTCGGTGGTAACAAGCGGTCAGCGGAACTTGACACCTCAGCATCCGCCAAGGGATGCTAGCCCTGCTGGACTTTTGTCCATTGCGGAGGAGACTTTAGCAGAGTTTCTATCAAAGGCCACTGGAACTGCTGTCGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCAATTTCTCATGGTTGCCCTGGAGTGGCTGCACGTGCATGCGGCCTTGTGGGTCTAGAACCTGCCAGGGTAGCTGAAATCCTCAAAGATCGGCTCACATGGTTTCGTGATTGCCGAACCGTGGATGTTCTCAATGTGATGTCCACCGGAAATGGGGGAACCATCGAACTTCTTTACATGCAGTTGTATGCGCCAACAACTCTGGCCCCTGGCCGTGACTTCTGGTTGCTGCGCTACACATCTCTTATGGAGGATGGTAGTCTTGTGGTCTGTGAAAGATCACTTAACAACACTCAGAACGGTCCTGCTATGCCCCCAGTGCAGCATTTTGTTAGAGCAGACATGCTGCCAAGTGGGTATCTCATTAGACCTTGTGAAGGAGGGGGGTCCATTATTCATATTGTTGATCATATGCTTTTAGAGCCCTGGAGTGTACCTGAAGTTTTGCGACCACTTTATGAGTCGTCAATGCTGCTTGCTCAAAGGTCAACTATGGCGGCTTTACGCCATTTGAGGCAGATTTCTCAAGAAGTTTCTCAGCCAAGTGTCACAGGATGGGGAAGAAGGCCTGCTGCTCTACGTGCACTTAGTCAGAGATTGAGCAAGGGCTTTAATGAAGCTGTTAATGGGTTTGCTGATGATGGCTGGTCCTTGTTAGAGAGTGATGGCATTGATGATGTCACCCTTCTTGTGAACTCATCACCTAGCAAGATGATGGGAGCAAACATTGGCTACAACAATGGGTTTCCATCCATGACCAGTTCTGTGCTATGTGCCAAAGCATCCATGTTATTGCAGAATGTCCCTCCAGCAATTCTTCTTAGATTCTTGCGGGAGCACCGATCAGAGTGGGCTGATAGCAGTATTGATGCTTACTCAGCTGCCGCCATCAAAGCTGGTCCCTGTGCCCTGCCTGGCGTCCGACCCGGAGGTTTTGGTGGTCAGGTTATTCTTCCACTAGCTCATACAATTGAGCATGAAGAGTTCATGGAGGTCATTAAGCTTGAAAACATGGGCTACTATAGGGATGACATGACTATACCCGGTGATATTTTCCTCTTGCAGCTTTGCAGTGGAGTGGATGAGCATGCAGTTGGCACCAGTGCAGAACTTGTATTTGCTCCTATCGATGCATCTTTCTCTGATGATGCTCCCATTTTACCTTCCGGTTTCCGCATTATACCACTCGATTCTAGCTCGGATCCTGCTAGTCCAAACCGAACACTTGATCTTGCTTCTGCACTTGAAGTTGGAACCACAGGGAACAAAGCATCTGGTGAGAATTCAGGCCATTCTGGGAGCACAAAATCTGTGATGACAATTGCATTCCAGTTTGCATTCGAAGTTCACCTTCAAGACAATATTGCAAGCATGGCCAGGCAATATGTCCGAAGTATTATTGCATCTGTTCAAAGGGTTTCATTGGCACTTTCTCCTTCCCATTTTGGTTCTAACAATGCTTTTCACTTGCCCCCTGGCACCCCTGAGGCACAAACACTTGCTCGCTGGATCAGTAACAGCTATAGGTTCTATCTTGGGGTTGAACTACTCAAGTGTGAGGGCAGTGAACCCATTCTCAAATCCCTTTGGAATCACACAGATGCAGTTTTGTGCTGCTCCTTGAAGGCATTACCTGTTTTCACATTTGCAAATCAAGCTGGACTTGACATGCTTGAGACAACCTTGGTTGCACTCCAAGACATCACCCTGGAGAAGATCTTTGATGATAATGGAAAGAAAACACTGTGCTCTGAGTTTCCCCAGATAATGCAGCAGGGTTTTATGTGTATTCAAGGTGGAATATGTTTGTCAAGCATGGGGAGGCCAGTGTCGTATGAGAGAGCAGTGGCATGGAAAGTAATAAACGAAGAGGAAACGGCTCATTGCATCTGTTTCATGTTCATCAATTGGTCTTTTGTCTGA 2520 0.4853 MMAVSSACKEGSKIALDNGKYVRYTPEQVEALERLYHDCPKPSSLRRQQLIRDCPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENTFFRQHTHNATLATTDTSCESVVTSGQRNLTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPARVAEILKDRLTWFRDCRTVDVLNVMSTGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLMEDGSLVVCERSLNNTQNGPAMPPVQHFVRADMLPSGYLIRPCEGGGSIIHIVDHMLLEPWSVPEVLRPLYESSMLLAQRSTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSKGFNEAVNGFADDGWSLLESDGIDDVTLLVNSSPSKMMGANIGYNNGFPSMTSSVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPCALPGVRPGGFGGQVILPLAHTIEHEEFMEVIKLENMGYYRDDMTIPGDIFLLQLCSGVDEHAVGTSAELVFAPIDASFSDDAPILPSGFRIIPLDSSSDPASPNRTLDLASALEVGTTGNKASGENSGHSGSTKSVMTIAFQFAFEVHLQDNIASMARQYVRSIIASVQRVSLALSPSHFGSNNAFHLPPGTPEAQTLARWISNSYRFYLGVELLKCEGSEPILKSLWNHTDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKTLCSEFPQIMQQGFMCIQGGICLSSMGRPVSYERAVAWKVINEEETAHCICFMFINWSFV* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1187 839 Pfam Homeodomain 20 78 IPR001356 GO:0003677
Aev08g1187 839 ProSiteProfiles 'Homeobox' domain profile. 15 79 IPR001356 GO:0003677
Aev08g1187 839 SUPERFAMILY Homeodomain-like 19 83 IPR009057 -
Aev08g1187 839 SUPERFAMILY Bet v1-like 163 374 - -
Aev08g1187 839 Coils Coil 75 109 - -
Aev08g1187 839 Gene3D - 13 86 - -
Aev08g1187 839 Gene3D - 198 378 IPR023393 -
Aev08g1187 839 PANTHER CLASS III HD-ZIP PROTEIN CNA1 5 839 - -
Aev08g1187 839 SMART START_1 163 373 IPR002913 GO:0008289
Aev08g1187 839 CDD homeodomain 20 80 IPR001356 GO:0003677
Aev08g1187 839 CDD START_ArGLABRA2_like 158 373 - -
Aev08g1187 839 ProSiteProfiles START domain profile. 154 368 IPR002913 GO:0008289
Aev08g1187 839 SMART HOX_1 17 83 IPR001356 GO:0003677
Aev08g1187 839 Pfam MEKHLA domain 698 838 IPR013978 -
Aev08g1187 839 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 839 IPR044830 GO:0003700
Aev08g1187 839 CDD bZIP 72 111 - -
Aev08g1187 839 Pfam START domain 164 372 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1187 Aev-Chr8 7427968 7433527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1187 16 839 Homeobox Transcription Factor Family AT4G32880 80.676 0.0 1397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev08g1187 START 3.2e-51 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1187 K09338 - gmx:100815727 1605.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1187 08 7427968 7433527 Aev08g1187 08 7427968 7433527 ECH