Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1172 ATGTTTTCCCGGCAAAACTCCCAACACCAAAACCCAACCGTCACCTCCAAAATGTCCAAAACACCCTTCATCAATCTCAAATTCCCACTCCACTTCTTCATTCTGTTCATCATCACACTACCCTCCCAAGTAATTTCACAGAAAACCTCCACCGAAGAAACCACCCTTCTCACCTTCAAACGCCAGCTGGGTGACCCACCGTCGCTGCAATCATGGCAACCGTCGTCATCTTCGCCGTGCGACTGGCCGGAGGTCAACTGCACAGGCGGCGCCGTCATGGAGCTCCACCTTGCCAACAAGGACATCGCCGTCCACGACCTCCCGGCGGCCACAATCTGTGGCGGCCTCAAGAGCCTCACCTACCTCGACCTCTCAAACAACTCCATCGCCGGCGAGTTCCCAACCTCACTCTACAACTGCTCCAACCTCCAATACCTCGACCTCTCACAGAACTACCTCTCCGGCGAGATTCCCGGCGACGTAAACCAACTCCAAAAACTAACGTTCCTCAACCTGGCCGCAAATAGCTTTATAGGCGACGTTCCTCCGTCGATCGGGAACCTCCCGGAGCTCAAAACACTCCACCTGTACCAGAACAACTTCAACGGAACCTTCCCGAAAGAGATCGGGAACCTTTCCAATCTCGAAACATTGGGTTTGGCGTACAATTACAGGTCTACCCCTGCACCGATCCCGATCGAGTTCGGGAACATGACGAGCTTGAAGTTCATGTGGATAGCGAATTGTAACCTAATTGGAGAAATTCCCGAGACTTTTAAAAATCTCGTGAATTTGGTGCAATTGGATTTGTCGATGAACAACTTGACAGGGAGAATTCCTAGTGCTCTGTTCTCGTTAAGGAATTTGCAGTTTCTATTTCTGTACCATAATAAGTTTTCCGGTGAGATACCTAGTTCAGTGCAGGCTCTGAATTTGGTTAATATTGATTTGAGTATGAACAACTTGACAGGTTCTATACCCAGCGATTTTGGAAAGGTGGAGAATTTGAAAGTTTTGCAATTGTTTTATAATCAATTATCTGGTGAGATTCCAAGAGGTTTAGGACTACTTCCAATGCTTGATACTTTCAAGGTGTTTGGGAACAAATTGAATGGAACTCTGCCTCCGGAATTAGGCCTGCACTCGAAGCTCGTGTCGTTCGAGGTTGGTGACAATCAGCTGAGTGGTGGGTTGCCGGAGAATTTGTGTGTTGGTGGTGCTCTTAGGGGTGTCATTGCCTTTTCCAACAATCTCAGTGGTGAATTGCCTCCATGGCTTGGGAATTGTAGTTCTCTTGTCACTGTTCAGCTTTACAATAATAGGTTTTCAGGGGAAGTTCCTTCTGGTTTGTGGACTTTGAGCAACCTTGGGACTTTGATGCTAAGCAACAACTCGTTTTCTGGTCAGATTCCAAGTAAATTGTCTTGGAACATGTCCAGATTGGAGATAAGGGACAACAAGTTCTCAGGAAATATATCTCTCGGGCTTTCTTCTGATGTGAATCTGGTGGTTTTTGATGCAAGTAACAACATGCTTTCGGGCGAGATTCCGAGGGGATTGACCAGTCTTTCTCGGATCACTACTATCATGCTTGATGGGAATCGACTCTCTGGTGAACTTCCATCGGAGATAATCTCATGGCAATCACTGAGTTCTTTAACACTCTCAAGAAACAACCTTTCTGGCCAAATCCCATTAGCTATGAGCAATCTTCCTAATCTGGTTTACTTGGACTTGTCTGAGAATGACTTGTCTGGTGAAATCCCAACTCAGCTTGCAAACTTGAGGTTTGTTTTCCTCAACTTGTCTTCTAACAAGTTCTCTGGGAGCATCCCTGATGAGTTCAATAACCTCGCCTATGACAACAGTTTCTTGAACAATCCTAATCTTTGTGCTTATGATCCAAAATTCAACCTATCTAGCTGCTTGACTAAAACCCCTTCACACTTCCGCGATTCGTCTTCGAAGTTCCTTGTCTTGATTGTTGTCGTTGCCATCATTGTGCTGCTCACCACTGCCTCCTTGGCCTTGTGTATGTTGAAGAAGCACGTGGGCAAGAAGCGCTGCGGCCGCAAGCTTTCAACATGGAGGCTCACTTCATTCCAGAGGCTTGATCTCACTGAAATCAACCTCTTCTCTAGTTTGACAGATAACAACCTCATAGGAAGTGGAGGCTTCGGGAAAGTTTACCGGATTGCTTCGAATCGTCCGGGCGTCTATGTTGCTGTGAAGAAGATTTGGAGGGAAAAAGATGTTGATGACAAACTGGATAAGGAGTTCATGGCTGAGGTTGAAATCTTGGGCAACATTAGGCACTCCAATGTAGTGAAGCTTTTGTGCTGCTACTCAAGCGAGAACTCGAAACTTCTTGTCTATGAGTACATGGAGAATCATAGCCTAGACAAGTGGCTCCATGGGAAGAAGAAAAATCCAGTTGCTGGGTTGACTTCACCCAACAAGAATCATGTGGTGTTAAGTTGGCCAATGAGGTTGAAGATTGCCATTGGAGCTGCACAAGGTCTATGTTACATGCACCATGAGTGCTCACCACCAATCATCCACCGAGATGTCAAATCTAGCAATATCCTGCTTGATGCTGAGTTCAGGGCTATTATAGCTGATTTTGGACTCGCCAAGATGTTGGTAAAGCCTGGGGAACCATACACAATGTCTGCTCTAGCAGGCTCTTTCGGCTACATAGCACCAGAGTATGCTTACTCGACCAAGATTAATGAGAAGGTGGATGTGTATAGTTTCGGGGTGGTGCTGCTAGAGCTGGTAACGGGAAGAGAGCCTAAGAATGGAGGTGAGCACGGGAGCAGCCTAGTTGATTGGGCATGGGAGCATTACAGTGAAGGGAAGTGTCTTGCAGATGGCATAGATGAGGATATCAAAGAAACATGTAATGTGGAAGAGATGACAAGAGTGTTCAAACTAGGCCTCATTTGCACAAGCACATTGCCCACAGCTAGGCCTAGTACCAGGGAGGTTTTGCAAGTTCTTCGTCAGTCTTGTCATTCAGGTTCTTCACGTAAAAGGGTTGCAGCAGACTTTGATATCACTCCTCTTCTTGGTGATAACAGGTACATATCCAGTTACAAGGATAGTAATGTTGTAAGCGAAAATGACGAAACCTGCTTGTATACCGTGTAG 3153 0.4627 MFSRQNSQHQNPTVTSKMSKTPFINLKFPLHFFILFIITLPSQVISQKTSTEETTLLTFKRQLGDPPSLQSWQPSSSSPCDWPEVNCTGGAVMELHLANKDIAVHDLPAATICGGLKSLTYLDLSNNSIAGEFPTSLYNCSNLQYLDLSQNYLSGEIPGDVNQLQKLTFLNLAANSFIGDVPPSIGNLPELKTLHLYQNNFNGTFPKEIGNLSNLETLGLAYNYRSTPAPIPIEFGNMTSLKFMWIANCNLIGEIPETFKNLVNLVQLDLSMNNLTGRIPSALFSLRNLQFLFLYHNKFSGEIPSSVQALNLVNIDLSMNNLTGSIPSDFGKVENLKVLQLFYNQLSGEIPRGLGLLPMLDTFKVFGNKLNGTLPPELGLHSKLVSFEVGDNQLSGGLPENLCVGGALRGVIAFSNNLSGELPPWLGNCSSLVTVQLYNNRFSGEVPSGLWTLSNLGTLMLSNNSFSGQIPSKLSWNMSRLEIRDNKFSGNISLGLSSDVNLVVFDASNNMLSGEIPRGLTSLSRITTIMLDGNRLSGELPSEIISWQSLSSLTLSRNNLSGQIPLAMSNLPNLVYLDLSENDLSGEIPTQLANLRFVFLNLSSNKFSGSIPDEFNNLAYDNSFLNNPNLCAYDPKFNLSSCLTKTPSHFRDSSSKFLVLIVVVAIIVLLTTASLALCMLKKHVGKKRCGRKLSTWRLTSFQRLDLTEINLFSSLTDNNLIGSGGFGKVYRIASNRPGVYVAVKKIWREKDVDDKLDKEFMAEVEILGNIRHSNVVKLLCCYSSENSKLLVYEYMENHSLDKWLHGKKKNPVAGLTSPNKNHVVLSWPMRLKIAIGAAQGLCYMHHECSPPIIHRDVKSSNILLDAEFRAIIADFGLAKMLVKPGEPYTMSALAGSFGYIAPEYAYSTKINEKVDVYSFGVVLLELVTGREPKNGGEHGSSLVDWAWEHYSEGKCLADGIDEDIKETCNVEEMTRVFKLGLICTSTLPTARPSTREVLQVLRQSCHSGSSRKRVAADFDITPLLGDNRYISSYKDSNVVSENDETCLYTV* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1172 1050 Gene3D Transferase(Phosphotransferase) domain 1 795 1020 - -
Aev08g1172 1050 Pfam Leucine rich repeat 253 299 IPR001611 GO:0005515
Aev08g1172 1050 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Aev08g1172 1050 ProSitePatterns Protein kinases ATP-binding region signature. 721 745 IPR017441 GO:0005524
Aev08g1172 1050 Gene3D Ribonuclease Inhibitor 312 356 IPR032675 -
Aev08g1172 1050 Gene3D Phosphorylase Kinase; domain 1 697 794 - -
Aev08g1172 1050 ProSitePatterns Serine/Threonine protein kinases active-site signature. 852 864 IPR008271 GO:0004672|GO:0006468
Aev08g1172 1050 Pfam Leucine rich repeat N-terminal domain 52 87 IPR013210 -
Aev08g1172 1050 SMART LRR_typ_2 453 477 IPR003591 -
Aev08g1172 1050 SMART LRR_typ_2 523 547 IPR003591 -
Aev08g1172 1050 SMART LRR_typ_2 116 140 IPR003591 -
Aev08g1172 1050 SMART LRR_typ_2 188 212 IPR003591 -
Aev08g1172 1050 SMART LRR_typ_2 571 595 IPR003591 -
Aev08g1172 1050 SMART LRR_typ_2 262 286 IPR003591 -
Aev08g1172 1050 SMART LRR_typ_2 333 357 IPR003591 -
Aev08g1172 1050 ProSiteProfiles Protein kinase domain profile. 715 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g1172 1050 SUPERFAMILY Protein kinase-like (PK-like) 710 1001 IPR011009 -
Aev08g1172 1050 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 33 1017 - -
Aev08g1172 1050 SUPERFAMILY L domain-like 286 613 - -
Aev08g1172 1050 ProSiteProfiles Leucine-rich repeat profile. 142 164 IPR001611 GO:0005515
Aev08g1172 1050 Gene3D Ribonuclease Inhibitor 230 311 IPR032675 -
Aev08g1172 1050 Gene3D Ribonuclease Inhibitor 362 642 IPR032675 -
Aev08g1172 1050 SUPERFAMILY L domain-like 61 398 - -
Aev08g1172 1050 Pfam Protein kinase domain 717 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g1172 1050 PRINTS Leucine-rich repeat signature 119 132 - -
Aev08g1172 1050 PRINTS Leucine-rich repeat signature 571 584 - -
Aev08g1172 1050 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 33 1017 - -
Aev08g1172 1050 Gene3D Ribonuclease Inhibitor 49 229 IPR032675 -
Aev08g1172 1050 SMART serkin_6 715 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1172 Aev-Chr8 7334794 7338077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1172 39 1043 Receptor kinase-like Gene Family AT5G25930 54.861 0.0 1061
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aev08g1172 Pkinase 2.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1172 K00924 - adu:107461025 1587.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1172 08 7334794 7338077 Aev08g1172 08 7334794 7338077 ECH