Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1138 ATGGGTACTGGTTGGAGAAGAGCCTTTTGCACTCGCGACCCAGAATCTACCATATCCGATAAGCCACACAGAAGCTCCAGCCCGAGCCCAAGCCCCAGAAGCTGTGCCAGATTGGGTTTTCTCTCCGGAAGTAGCAACCCTTCCACTCCAAGGTTGCAGCAGCAGCAGCAGCAACAATCTCAGCCTGTTTCGAGCCCAAGTTTGCGTTGCAGAACAATCGCCGAAGCTGCAGCTGCTATAACAAATGATAGCCCCAGAATTCAAAGCAAAAACACACCAAGAGCAAGCAAGTCTCCCAAGATACTCTCAGCTTCAAATCCAACTTCCCCGCGCTCCCCTCTCAAGTTGTCCCTCTTCAAAAACAGCTTCAAATTCAGGAGTAGCTGCGGGATATGCTTGAACAGCGTGAAGACGGGACAAGGCACGGCCATTTACACCGCGGAATGTGGACACGCTTTTCATTTCCCTTGCATCGCCGCACATGTGCGCAAGCATGGAAACCTTGTGTGCCCCGTCTGCAACGCCGCCTGGAAGGACGTGCCTCTTCTCGCCGCTCACAAGAACCTCCCTCCAGAGTCAGAGCCTCAAAACGACGTCGCTCAGAGGACCAATGCAAGTGACAAGAAGCCAACCGAAAACGCTTCGCCGGTTTTCACAACCAAGCCTGTTGAGCCACCTCAGCAAAACCATAACTACCTTCAGAATCAGAAGAAGCATTCCGATGCAGTAATTAGATTCTACGACGACGATGAGCCACTCCTTTCTCCGACCTCCGGAGGACGGATCGTTCCTATTCCCGAAGCAGACGAAAATGCAGAAGACGAAGACGATGACGCCGGAGAATTCCAAGGCTTCTTCGTCAATCCAAAGCCATCATCCTCAATCAAATCCTACTCTGACGACTTACAAACCGTTGAAGCAGATCCTAGAACCGTTCAGGTCAAGCTCATGCCTGAGTGTGCAGTAGTATCAGTCTCCAGAACTCACGAGACTTACGCCTTGCTCCTCAAAGTGAAGGCTCCGCCGCCGCCTCCTCCAGCACGGAGCAACGGTGGTGGCAGCCTCTTGGACCCATCGCAGCGCGCGCCAATAGATCTGGTGACGGTTCTAGACGTTGGAGGAAGCATGACAGGTGCGAAGCTCCACATGTTGAAGCGCGCGATGCGTTTGGTTATCTCATCACTTGGCTCCGCAGACAGGCTCTCCATCGTGGCTTTCTCAGCTTCTCCCAAACGGCTCCTACCGTTGCGGAGAATGACGCCACAGGGACAGCGCGTGGCCCGACGCATCGTCGACAGACTCGTCCCAGGCCAAGGAAACTGCGTCGGCGACGCGCTCCGCAAGGCCACAAAGGTCCTCGAGGACCGCAGGGAGAGAAATCCCGTCGCGAGCGTGATGCTCCTATCGGACGGTCAAGATGAGAGGGTCCAAGCCAGTAACAAATCAAATCAACGGAAGGCATCAAGCCACGTGTCGTCGACTCGGTTCGCACACATCGAGATCCCGGTTCATGCGTTCGGGTTCGGCACCAAAAGCGGTTACAGCAACGAACCCGCCGAGGACGCGTTTGCGAAGCGCGTGGGTGGTTTACTGAGCGTGGTGGTTCAGGACTTGAGAATTCAGCTAGGTGTTCAGTGCGATTCGGCTGAGATCAGCGCCATTTACTCGTGCGGTTCAAAGCCCACGCTTCTGAGTTGTGGAGCCGTTAGGCTCGGCGATTTGTACGCTGAGGAAGAGAGAGAGCTCTTGGTGGAGCTGAGGGTTCCCGTTCACGCGCCGTTGGGTTTGGGGTCCCGCCACGTGATCACCGTACGGTGCCTCTACAAGGATCCTGCGAGCCAAGAGATCGTGTACGGTAGAGAGCAGGGACTTGTGGTACCCCCTCCGCAGAGCCCGCGCTCTTCTTCCGGCACCAGAACCGAGAGGCTTAAAAACCTCTTCATTACGACACGTGCCATCGCTGAATCGCGGAGGCTGGTTGAGCACGGTAACGATTTCACCAGCGCGCATCACCTGCTAGCTTCGGCGCGTGCGCTCTTGGTTCAGTCAGGTTCGGGTTCGGCTGAGGAGTACGTTCGTGGTTTGGAGGCTGAGCTGGCGGAGGTTCATTGGTTGAGGCAGCAGCAGATTCAGATGGAGAAGGTTCAGGTGCAGCAGCAGCAGCAACATGTGATGGTGGTGCAGCGGCGGAGAGGGAGCGATAGAGAGAGGGATTTGGCGACGCTGGTAGATGAAAACGGCGAGCCGCTTACGCCGACTTCGGCTTGGCGCGCCGCTGAGAAGCTGGCTAAGATGGCTATGATGAAGAAGTCATTGAATAGGGTCAGCGACTTGCACGGCTTCGAAAACGCTAGGTTTTAA 2361 0.5557 MGTGWRRAFCTRDPESTISDKPHRSSSPSPSPRSCARLGFLSGSSNPSTPRLQQQQQQQSQPVSSPSLRCRTIAEAAAAITNDSPRIQSKNTPRASKSPKILSASNPTSPRSPLKLSLFKNSFKFRSSCGICLNSVKTGQGTAIYTAECGHAFHFPCIAAHVRKHGNLVCPVCNAAWKDVPLLAAHKNLPPESEPQNDVAQRTNASDKKPTENASPVFTTKPVEPPQQNHNYLQNQKKHSDAVIRFYDDDEPLLSPTSGGRIVPIPEADENAEDEDDDAGEFQGFFVNPKPSSSIKSYSDDLQTVEADPRTVQVKLMPECAVVSVSRTHETYALLLKVKAPPPPPPARSNGGGSLLDPSQRAPIDLVTVLDVGGSMTGAKLHMLKRAMRLVISSLGSADRLSIVAFSASPKRLLPLRRMTPQGQRVARRIVDRLVPGQGNCVGDALRKATKVLEDRRERNPVASVMLLSDGQDERVQASNKSNQRKASSHVSSTRFAHIEIPVHAFGFGTKSGYSNEPAEDAFAKRVGGLLSVVVQDLRIQLGVQCDSAEISAIYSCGSKPTLLSCGAVRLGDLYAEEERELLVELRVPVHAPLGLGSRHVITVRCLYKDPASQEIVYGREQGLVVPPPQSPRSSSGTRTERLKNLFITTRAIAESRRLVEHGNDFTSAHHLLASARALLVQSGSGSAEEYVRGLEAELAEVHWLRQQQIQMEKVQVQQQQQHVMVVQRRRGSDRERDLATLVDENGEPLTPTSAWRAAEKLAKMAMMKKSLNRVSDLHGFENARF* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1138 786 SUPERFAMILY vWA-like 363 542 IPR036465 -
Aev08g1138 786 SMART VWA_4 363 546 IPR002035 -
Aev08g1138 786 ProSiteProfiles VWFA domain profile. 365 509 IPR002035 -
Aev08g1138 786 SUPERFAMILY RING/U-box 123 179 - -
Aev08g1138 786 MobiDBLite consensus disorder prediction 473 493 - -
Aev08g1138 786 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 183 IPR013083 -
Aev08g1138 786 MobiDBLite consensus disorder prediction 187 231 - -
Aev08g1138 786 MobiDBLite consensus disorder prediction 81 113 - -
Aev08g1138 786 MobiDBLite consensus disorder prediction 21 68 - -
Aev08g1138 786 CDD RING-H2 129 174 - -
Aev08g1138 786 Pfam RING-like zinc finger 129 158 IPR001841 -
Aev08g1138 786 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 3 786 - -
Aev08g1138 786 SMART ring_2 129 173 IPR001841 -
Aev08g1138 786 Pfam von Willebrand factor type A domain 366 472 IPR002035 -
Aev08g1138 786 CDD vWA_C3HC4_type 364 535 - -
Aev08g1138 786 MobiDBLite consensus disorder prediction 338 358 - -
Aev08g1138 786 MobiDBLite consensus disorder prediction 82 113 - -
Aev08g1138 786 MobiDBLite consensus disorder prediction 1 68 - -
Aev08g1138 786 MobiDBLite consensus disorder prediction 472 493 - -
Aev08g1138 786 Gene3D von Willebrand factor, type A domain 365 540 IPR036465 -
Aev08g1138 786 ProSiteProfiles Zinc finger RING-type profile. 129 174 IPR001841 -
Aev08g1138 786 MobiDBLite consensus disorder prediction 194 231 - -
Aev08g1138 786 PANTHER E3 UBIQUITIN-PROTEIN LIGASE WAV3 3 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1138 Aev-Chr8 7052484 7054954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1138 129 179 C3H Transcription Factor Family AT1G74410 41.176 9.09e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1138 - - lja:Lj3g3v3131860.1 1080.09