Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1137 ATGCTGATGTCGCCGCCGCCGCTGCTCGGCATAGGGGATGAGGAGGTCAAAAGCAATGTTACTTTGTTGGTTTCCTCAACCACCATAGAAAGTGTGCGAGTCAAGAGCTCGGAATTGAAAGAACGAAACTACATGGGACTATCTAGTTGTTCTTCTGTGGACAGCTCAGTTCCATCCTTCTCAGATGAGAGTAAGGGTAAACTGAACCTCAAAGCCACAGAACTCAGGCTTGGACTTCCGGGATCTCAATCTCCTGAGAGGGATTCTGATCATTGCTTGAGAAAATCAACTCAATTTGATGAAAAGCCTCTGTTTCCTCTGCGCCCCTCGACCGATGATCACCACTCCTCAGCGAAGGCTGCTGTTTTGGGTAACAAGAGGGGGTTCTCAGATGCCATGAGTGGTTTCCCAGAGGGGAAATTCCTGGTCAATTCGGAGGCGAATACAATTCTGTCACCAAGACCATCTTCTAACTTGGGAGTAAAACCTGGTTCTATGCTTGAGAAAGTTGGGGCTCAACAAGCCAAAATGAAAGAAGTAGCAACTACAAAGGTGGGGGTCGATAAGGCCAATGAAACAGGACCAATTCTTAATGGTTCTGCAAATAATAATAGCAGTGCACCAGCTACCAAGGCTCAGGTCGTGGGGTGGCCGCCTATAAGATCATTTAGGAAGAATTCATTGGCTACTAACTCAAAGAACACCGAAGAAGTTGATGGGAAAATGGGATCTGGTGCACTGTTTGTCAAGGTCAGTATGGACGGTGCCCCATATTTAAGGAAAGTAGACTTGAAGAATTACACTGCGTATCCAGAACTATCTTCGGCTTTAGAGAAGATGTTCAGCTGTTTTACGATAAGTCAATGTGGTTCTCATGGAACTCTGGGAGGGGAGATGCTGAATGAAACCAAGCTGAAGGATCTTCTTCATGGGTCAGAATACGTTCTTACTTATGAAGATAAAGACGGCGACTGGATGCTTGTCGGTGATGTTCCTTGGGATATGTTTATCGAAACATGCAGGAGGATGAGAATCATGAAGAGCTCTGATGCCATTGGTCTTGCTCCGAGGGCTGTTGAAAAGAGCAAGAGCAGGAACTAG 1101 0.4614 MLMSPPPLLGIGDEEVKSNVTLLVSSTTIESVRVKSSELKERNYMGLSSCSSVDSSVPSFSDESKGKLNLKATELRLGLPGSQSPERDSDHCLRKSTQFDEKPLFPLRPSTDDHHSSAKAAVLGNKRGFSDAMSGFPEGKFLVNSEANTILSPRPSSNLGVKPGSMLEKVGAQQAKMKEVATTKVGVDKANETGPILNGSANNNSSAPATKAQVVGWPPIRSFRKNSLATNSKNTEEVDGKMGSGALFVKVSMDGAPYLRKVDLKNYTAYPELSSALEKMFSCFTISQCGSHGTLGGEMLNETKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWDMFIETCRRMRIMKSSDAIGLAPRAVEKSKSRN* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1137 366 Gene3D - 241 360 - -
Aev08g1137 366 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 24 360 IPR003311 GO:0005634|GO:0006355
Aev08g1137 366 ProSiteProfiles PB1 domain profile. 246 348 IPR000270 GO:0005515
Aev08g1137 366 PANTHER AUXIN-INDUCED PROTEIN 24 360 - -
Aev08g1137 366 Pfam AUX/IAA family 73 357 IPR033389 -
Aev08g1137 366 SUPERFAMILY CAD & PB1 domains 242 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1137 Aev-Chr8 7033579 7037154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1137 249 357 B3 DNA Binding Superfamily AT1G59750 29.358 4.22e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Aev08g1137 AUX_IAA 5.7e-91 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1137 K14484 - gmx:100815447 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1137 08 7033579 7037154 Aev08g1137 08 7033579 7037154 ECH