Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1133 ATGGAGCTCTATGACCATGATTTCTTGGAGGAACTAATGGCTCTTAGAAGAGAAAATTGGGAAACGAATCCAACTTCAGAAGAAACTCAGTTCTTCTTCCAAAATGGATGGAGTTATGACTGTTTTGATCAAAACTCCATGGCTTTTCTCCCAAACTCTTCTTTTGGTCAAGATTTTATTATTCCTCATCAGTGTTACAATAACAATGATTACCCCTTCAATGAAATCCATGACTCTAGCTCCTTATTACTTGATGAACCTTCCCCACCACAGATCATGGATTCATACTATAATAATAATAATAATAATACCAACAATACCCTTGATACCCCTCCATTTCTTGCTCAAGAGGAATACCCATTTTCCATGATGGAGGAAGAGGATCATGGTAATTTTCTTGGGGAGGAGCTTCAGAATTTGGAGCTGCAAGCCTCATCATGCAAAGTGGAGCCAGTAACTCAGTCCCCTGAAATGCCAGTTTTCAACATTGGTGTGGGAATGGAAAGGAAGAACAGAGCAAAGAAGATTCAGGGGCAACCATCCAAGAATCTAATGGCTGAGAGGAGAAGAAGAAAAAGATTGAATGATAGACTCTCAATGCTAAGAGCCATTGTTCCTAAGATAAGTAAGATGGACAGAACTTCTATACTTGGAGACACTATTGATTACATGAAAGAACTTCTTGAGAAGATCAACAATTTGCAACAGGAAATACAAGTTGATTCAACCATGGCAAGCATTTTCAAAGATGTAAAGCCAAATGAAATCTTAATCAGAAATTCACCCAAGTTTGAGGTTGAGAGGGATGTGGACACAAGGGTTGAAATTTGCTGTGCAGGGAAGCCAGGGTTGTTGCTATCTACAGTGAGCACCATTGAAGCATTAGGCCTTGAGATTCAACAATGTGTCATTAGCTGTTTCAATGATTTCACAATGCAAGCTTCTTGCTCTGAGGAATTGGAGCAAAGGGCAATGGTGAGTTCTGAAGATATAAAGCAAGCATTGTTTAGAAGTGCAGGATATGGAGGAAGGTGTTTGTGA 1041 0.3948 MELYDHDFLEELMALRRENWETNPTSEETQFFFQNGWSYDCFDQNSMAFLPNSSFGQDFIIPHQCYNNNDYPFNEIHDSSSLLLDEPSPPQIMDSYYNNNNNNTNNTLDTPPFLAQEEYPFSMMEEEDHGNFLGEELQNLELQASSCKVEPVTQSPEMPVFNIGVGMERKNRAKKIQGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYMKELLEKINNLQQEIQVDSTMASIFKDVKPNEILIRNSPKFEVERDVDTRVEICCAGKPGLLLSTVSTIEALGLEIQQCVISCFNDFTMQASCSEELEQRAMVSSEDIKQALFRSAGYGGRCL* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1133 346 CDD ACT_UUR-ACR-like 272 313 - -
Aev08g1133 346 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 346 - -
Aev08g1133 346 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 227 IPR011598 GO:0046983
Aev08g1133 346 Coils Coil 217 244 - -
Aev08g1133 346 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 182 240 IPR036638 GO:0046983
Aev08g1133 346 Gene3D - 186 260 IPR036638 GO:0046983
Aev08g1133 346 Pfam Helix-loop-helix DNA-binding domain 184 227 IPR011598 GO:0046983
Aev08g1133 346 PANTHER DNA BINDING PROTEIN 3 346 - -
Aev08g1133 346 SMART finulus 184 233 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1133 Aev-Chr8 6995864 6997370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1133 109 346 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 56.790 2.51e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev08g1133 HLH 1.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1133 - - gmx:100812578 508.834