Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1128 ATGTCCATCCAAGGCGTACGGTTGCACATCCAAGATAGCTATGTGGTGATGGACAATGGCATTGTCCAAGTAACGTTGTCAAATCCAGATGGAATTGTTACTGGGATACAATATAATGGTCTTGACAATGTGCTTGAAGTTCTCAACAAGGAGACTAATAGAGGGTACTGGGACCTTGTTTGGAGTTCTCCAGGAAGTAAAGGAATCTTTGACGTGATTAAAGGAACTTGTTTCAGAGTTATTGTTCAAAATGAGGAACAGGTGGAGATTTCATTCACAAGAATGTGGGATCCTTCACTTGAGGGAAAGGCTGTCCCCTTGAATATTGACAAAAGATTCATAATGCTCCGTGGTTCATCTGGCTTCTACTCTTATGGAATATATGAGCACTTGAGTGGATGGCCAGATTTTGATATTAGTGAAACCAGGATCACTTTCAAGCTTAGGAAATACAAGTTTCAATACATGGCTGTGGCTGACAATAGACAAAGGATTATGCCCCTTCCAGATGATCGGTTACCTGGAAGATGCAAAACCTTGGGCTACCAAGAAGCTGTCCTACTAGTCAATCCCAAGGATCCACGACTGCAAGGCGAGGTGGATGACAAATATCAGTATTCATGTGACAACATAGATAATCGAGTCCATGGGTGGGTATCTTCCAATCCACCAGTGGGATTCTGGCAGATCACACCAAGTGATGAGTTTCGTTCTGGTGGACCTGTCAAGCAGAATTTGACCTCACATGTAGGCCCCACCACGCTTGCAATGTTTCTTAGTGGTCACTATGCGGGACAAGATTTGGTACCGAAATTTAGAGGCGGTGAGCCCTGGAAGAAGGTTTTTGGTCCTGTATTTATTTACCTTAATTCAGGATCAGTTGACGACCCACACTTGCTATGGGAGGATGCAAAAATACAGATGATGAATGAAGTTCAAAGCTGGCCTTATTCTTTCCCAGCTTCAGAGGATTTTCCAAAGGCAGATCAAAGGGGCAACGTCAGTGGCAGACTACTTGTCTTGGACAGGTACGTCAGCACAGACTTAATATCCGCAAAGGGTGCTTATGTTGGTCTCGCCCCGCCAGGAGATGTAGGGTCATGGCAAAGAGAATGCAAGCACTATCAATTCTGGACCAGAGCAGATGAGAATGGAATTTTTACGATCAGGAATATACGTGAAGGCGACTATAACCTTTATGCTTGGGTTCCTGGTTTTGTTGGGGACTACAGATTTAATGATATTATGAAGATAACCTCAGGTTCTTATATTGAATTAGGTGAGCTAGTATACGAGCCTCCAAGGGATGGTCCCACATTGTGGGAAATAGGTATTCCTGATAGATCCGCTGCAGAGTTTTATGTTCCTGATCCCGATCCACAATATGTTAATAGGCTTTTTATCAACCATCCAGACAGGTTCAGGCAGTATGGATTGTGGGACAGGTACACAGAGTTGTATCCTGATGCAGATTTGGTCTACACTATTGGTGTTAGTGACTATACAAAGGATTGGTTTTTTGCTCACGTTCCAAGAAAAAAAGACGGTAGTCATCAAGGAACAACTTGGCAAATCAAGTTTGAAGTCAATGGTGTGGATCAGGGAAGTACATATAAACTGAGAGTTGCAATTGCATCTGCAACATTAGCTGAATTGCAGATTCGAGTAAATGATCCCAATGCAAGGCGTCCTGTGTTTACCACTGGGTTAATAGGAAGGGATAACTCAATTGCAAGACATGGAATTCATGGACTCTATTGGCTCTACAATGTGAATATACCTGGTTCTCTTCTTGTTAATGGCACCAATACTTTTTATTTTACACAACCACGATGCACCAATTGCTTCCAGGGTATCATGTATGATTATGTTCGTTTGGAAGGACCACCACCACCACCTTGTTCCTAA 1908 0.4287 MSIQGVRLHIQDSYVVMDNGIVQVTLSNPDGIVTGIQYNGLDNVLEVLNKETNRGYWDLVWSSPGSKGIFDVIKGTCFRVIVQNEEQVEISFTRMWDPSLEGKAVPLNIDKRFIMLRGSSGFYSYGIYEHLSGWPDFDISETRITFKLRKYKFQYMAVADNRQRIMPLPDDRLPGRCKTLGYQEAVLLVNPKDPRLQGEVDDKYQYSCDNIDNRVHGWVSSNPPVGFWQITPSDEFRSGGPVKQNLTSHVGPTTLAMFLSGHYAGQDLVPKFRGGEPWKKVFGPVFIYLNSGSVDDPHLLWEDAKIQMMNEVQSWPYSFPASEDFPKADQRGNVSGRLLVLDRYVSTDLISAKGAYVGLAPPGDVGSWQRECKHYQFWTRADENGIFTIRNIREGDYNLYAWVPGFVGDYRFNDIMKITSGSYIELGELVYEPPRDGPTLWEIGIPDRSAAEFYVPDPDPQYVNRLFINHPDRFRQYGLWDRYTELYPDADLVYTIGVSDYTKDWFFAHVPRKKDGSHQGTTWQIKFEVNGVDQGSTYKLRVAIASATLAELQIRVNDPNARRPVFTTGLIGRDNSIARHGIHGLYWLYNVNIPGSLLVNGTNTFYFTQPRCTNCFQGIMYDYVRLEGPPPPPCS* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1128 635 Gene3D - 327 423 - -
Aev08g1128 635 Gene3D - 437 627 - -
Aev08g1128 635 SUPERFAMILY Galactose-binding domain-like 436 627 IPR008979 -
Aev08g1128 635 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 630 - -
Aev08g1128 635 SUPERFAMILY Starch-binding domain-like 329 422 IPR013784 GO:0030246
Aev08g1128 635 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 630 - -
Aev08g1128 635 Pfam Rhamnogalacturonate lyase family 9 200 IPR010325 -
Aev08g1128 635 Pfam Polysaccharide lyase family 4, domain II 353 425 IPR029413 -
Aev08g1128 635 Gene3D - 8 306 IPR014718 GO:0030246
Aev08g1128 635 CDD RGL4_C 441 627 - -
Aev08g1128 635 CDD RGL4_M 330 429 IPR029413 -
Aev08g1128 635 Pfam Polysaccharide lyase family 4, domain III 439 626 IPR029411 -
Aev08g1128 635 SUPERFAMILY Galactose mutarotase-like 18 297 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aev08g1128 635 CDD RGL4_N 6 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1128 Aev-Chr8 6926335 6930806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1128 1 630 Polysaccharide Lyase AT1G09910 72.583 0.0 975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1128 K18195 - gmx:100814185 1161.36