Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1127 ATGCCGCCACTAGGGGTGCAACTGATTATTCAAGATCGCCATGTGGTAATGGACAATGGCATATTAAGAGTTACCTTATCAAATCCTGGGGGAATTGTCACTGGAATACAGTATAATGGAATCGACAATTTGCTTGAAGTTTTGAATGAGGAATCTAATAGAGGGTATTGGGACCTTGTTTGGAGCTCACCAACAACTCCAGGAACCAGTAGTATATTTGATGTGATAAAGGGAAGCGCTTTCAAAGTGATAGTGGAAAATGAGGATCAAGTTGAGATTTCTTTCACTAGGACTTGGGACCCTTCCCTCCAGGACAAGATGGTTCCTCTAAACATTGATAAAAGGTTCATAATGCTTCGTGGCTCTTCGGGCTTTTACTCTTATGCAATTTATGAGCACTTAGGCGACTGGCCTGCTTTCAATCTTGACGAAACTAGAATTGCTTTCAAGCTCAGAAAAGACAAGTTCCATTATATGGCGATGGCAGATAATAGACAAAGAAATTTGCCTCTTCCAGATGATCGGTTACCATCTAGAGGTCAAGCCCTTGCTTACCCAGAAGCAGTTCTTCTTCTCAATCCTATTGAACCCGAACTCAAAGGAGAGGTGGATGACAAGTACCAATATTCATGTGAGAACAAAGATAACAGAGTTCATGGATGGATCTCCATGGATAACAATAATAACCCCGCAGTGGGATTCTGGGTTATTACTCCAAGCGATGAGTTCCGATCTGGTGGACCCCTCAAACAAAACTTGACTTCCCATGTGGGACCCACTTCTCTTGCTATGTTCCTAAGTGCCCATTATAGCGGAGAGGATCTGGTGCCAAAGATCAAAGCTGGAGAAGCATGGAAGAAGGTTTTTGGTCCTGTTTTCATCTATGTCAATTCTCCTTATGATGGAGATGACCCCCTTAAGCTATGGGAAGACGCTAAACTCCAGATGATGGTGGAAGTACAGAGCTGGCCCTACAATTTTCCTGAATCAGATGATTTTCCTAAGTGGGACCAGCGCGGCAGTCTTAGTGGCAGGCTATTGGTTAGAGAAAAGAATATAAGCGTTGACGATTATGTTTCAGCAAAAGGCGCCTATGTTGGCTTGGCTCCACCAGGAGAAGTTGGGTCATGGCAAAGAGAATGCAAGGATTATCAGTTCTGGACCAAAGCAGATGAAGAGGGGTATTTCTCCATCAGCAATATTCGTCCTGGTGACTATAATTTATATGCATGGGTACCTGGTTTTATTGGTGACTACAAATATGATGTAGTTATGAGCATAACAGAAGGTTCTTTCATTGACATTGGAACTCTTGCATATGATGCTCCAAGAGATGGACCAACATTGTGGGAAATAGGAGTCCCTGATCGCTCTGCTGCTGAGTTCTATGTTCCTGGTCCTAATCCCAAATATATCAACAAACTCTATGTTAATCATCCTGACAAGTTTAGGCAGTATGGGTTATGGGAGAGATATGCAGAGCTATACCCTGACAAAGACTTGGTCTACACAGTTGGTGTTAGTGACTACACCAAAGATTGGTTCTTTGCTCAAGTTACCAGGAAGAAAGATGATAATACATACCAAGGAACCACATGGCAAGTCAAATTTCAGCTTCACAATGTTGACAAAAGCAGTAGCTATAAACTGCGAGTGGCTTTGGCATCAGTCTCATTAGCTGAACTCCAGGTCCGAGTTAATGATGCGAAGGCGACTCGTCCTTTATTTTCAAGTGGGCTAATAGGAAGGGATAACGCAATTGCAAGGCACGGAATTCATGGGCTTTATTGGCTTTACAATGTTGACATACCAGGTGCTAAACTTGTTGAAGGAGACAATACAATCTTTTTTACTCAGACAAGAGGCAATAGCCCATTTCAGTATATTATGTACGATTACATTCGTCTCGAAGGTCCATTAACTCTGCCCAAGAAAAATTGA 1941 0.4245 MPPLGVQLIIQDRHVVMDNGILRVTLSNPGGIVTGIQYNGIDNLLEVLNEESNRGYWDLVWSSPTTPGTSSIFDVIKGSAFKVIVENEDQVEISFTRTWDPSLQDKMVPLNIDKRFIMLRGSSGFYSYAIYEHLGDWPAFNLDETRIAFKLRKDKFHYMAMADNRQRNLPLPDDRLPSRGQALAYPEAVLLLNPIEPELKGEVDDKYQYSCENKDNRVHGWISMDNNNNPAVGFWVITPSDEFRSGGPLKQNLTSHVGPTSLAMFLSAHYSGEDLVPKIKAGEAWKKVFGPVFIYVNSPYDGDDPLKLWEDAKLQMMVEVQSWPYNFPESDDFPKWDQRGSLSGRLLVREKNISVDDYVSAKGAYVGLAPPGEVGSWQRECKDYQFWTKADEEGYFSISNIRPGDYNLYAWVPGFIGDYKYDVVMSITEGSFIDIGTLAYDAPRDGPTLWEIGVPDRSAAEFYVPGPNPKYINKLYVNHPDKFRQYGLWERYAELYPDKDLVYTVGVSDYTKDWFFAQVTRKKDDNTYQGTTWQVKFQLHNVDKSSSYKLRVALASVSLAELQVRVNDAKATRPLFSSGLIGRDNAIARHGIHGLYWLYNVDIPGAKLVEGDNTIFFTQTRGNSPFQYIMYDYIRLEGPLTLPKKN* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1127 646 Gene3D - 337 431 - -
Aev08g1127 646 SUPERFAMILY Galactose mutarotase-like 14 298 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aev08g1127 646 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 640 - -
Aev08g1127 646 Pfam Rhamnogalacturonate lyase family 10 203 IPR010325 -
Aev08g1127 646 CDD RGL4_M 338 438 IPR029413 -
Aev08g1127 646 CDD RGL4_N 11 308 - -
Aev08g1127 646 Gene3D - 7 304 IPR014718 GO:0030246
Aev08g1127 646 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 640 - -
Aev08g1127 646 SUPERFAMILY Starch-binding domain-like 336 426 IPR013784 GO:0030246
Aev08g1127 646 Pfam Polysaccharide lyase family 4, domain III 448 636 IPR029411 -
Aev08g1127 646 SUPERFAMILY Galactose-binding domain-like 445 637 IPR008979 -
Aev08g1127 646 CDD RGL4_C 450 637 - -
Aev08g1127 646 Pfam Polysaccharide lyase family 4, domain II 362 431 IPR029413 -
Aev08g1127 646 Gene3D - 446 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1127 Aev-Chr8 6920024 6924022 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1127 1 639 Polysaccharide Lyase AT1G09890 70.781 0.0 944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1127 K18195 - gmx:100793563 1157.9