Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1125 ATGCTGAGGCAGAGAAGAAGATCCTTCTCCATGTCATCACAAGCAGTGCAGTTGCGTATTGAAGACAATAATGTTGTGATGGACAATGGTATACTTCAAGTGTACATATCCAAACCGAGTGGATTCATCACTAAAATACAATATAATGGCGTAGATAATCTTCTTGAAATTTCTGCTGGAGGAGATGATAGAGGGTACTGGGACATTGTTTGGAGTGAAGCAGATAGCGCAGGAACAACAGGAAGATATGAACGAGTTGTAGGAACAAGTTATAAAGTTATAGTGGAAAATGAACAACAGGTGGAAATTTCATTTACGACAACATGGGATCCATCCATAACAAAAAAGCAACCGCCTCTAAATATCGACAAAAGATATGTGATGCTGAGTAATTCTTCAGGCTTCTACTCTTATGCCATATTTGAACACCTACAAGAATGGCCTGCTTTCAACATACCTCAGATCAGAATGGTCTTAAGGCTTCGAAAAGACAAGTTTCATTATATGGCGATAGCCGATAATAGACAAAGGTACATGCCTCTTCCAGAGGATAGATTACCAAGAAGAGGAAAAGAACTGAGTCCACCAGAAGCAGTGTTGCTCATAGATCCAGTGGAACCAGAGTTCAAGGGAGAGGTGGACGACAAGTACCAATACTCAAGCGACAACAAGGACCTTAAGGTGCATGGATGGATAAGCTCTGAAACAGAAACTGATCCAAAAAATAATACTGCCTTAGGATTTTGGGTAATCATACCCAGCAATGAGTTTAGGTCAGGTGGTCCTCTTAAACAGAACCTTACCTCCCATGTTGGCCCTATCACTCTCGCAATGTTTCACAGTGCTCATTACGGAGGGGAGGATTTAGTTATGAAACTCCAATCAAATGAGCCATGGAAAAAGGTTTTTGGTCCAATTTTTGTATATCTTAACACGGCATCGGATGGACAGGACCAATCATGGCTGTGGAAGGATGCCAAAGATCAGATGACAAAGGAAGTTCAAAGTTGGCCCTATGATTTTCCAGATTCAGAGGATTTTCACAAGTCTGACCAACGTGGCAGTGTTTATGGCAAATTACAAGTCCTAGACAGATGCATAAGTGAGGACCACATATTGGCAGAAGGAGCATTTGTAGGTCTGGCACCACCAGGGGACACTGGATCATGGCAAACAGAATGCAAGGGATACCAATTTTGGACTCAAGCAAACGAAAAAGGGTCCTTCTCAATCAATAATATACTCATTGGAGATTATAATCTCTATGCATGGGTTCCGGGTTTCATTGGAGAGTATAGGAACAATCACGTCCTTACCATAAAGCCAGGTAGTAAAATTAATGTTGGTGACATTGTTTTTGAGCCCCCAAGAAATGGACCAACATTATGGGAAATAGGCATTCCTGATCGCTCTGCTGCTGAATTCTATGTTCCTGATCCTAATCCTAATTACATAAACAAGCTTTATGTTAATCATCCAGATAAGTTTAGGCAGTATGGCCTATGGGAAAGATATGCAGAGTTGTACCCAAATGAGGATTTAATTTATAAAGTTGGTGATAGTGACTATAGAAAAGATTGGTTCTTTGCACATGTTACCAGGAAGGGAGATGATGGCACTTACCAAGGAACTACATGGCAAATTAAATTCAAGCTTCATAATATGAAAAGAAGAGGTACCTATAAGCTGCGAGTGGCGCTCGCAGCCGCATATGCCTCCGAGTTACAGGTTAGAGTGAATGATCCAAAGCAGCATTCACCCCTATTTACAACAGGGGTAATTGGAAAGGACAATGCAATAGCTAGACATGGGATTCATGGACTCTACAGGCTATACAATATTGATGTGCCATTTCATTTGCTGGTGAAAGGAGACAACACTATTTATCTAACACAAACTATAGCCACTGGACCCTTTGAGGGTATAATGTATGATTATATTCGCTTAGAAGGTCCTTCTACTCATTATTAA 1971 0.4079 MLRQRRRSFSMSSQAVQLRIEDNNVVMDNGILQVYISKPSGFITKIQYNGVDNLLEISAGGDDRGYWDIVWSEADSAGTTGRYERVVGTSYKVIVENEQQVEISFTTTWDPSITKKQPPLNIDKRYVMLSNSSGFYSYAIFEHLQEWPAFNIPQIRMVLRLRKDKFHYMAIADNRQRYMPLPEDRLPRRGKELSPPEAVLLIDPVEPEFKGEVDDKYQYSSDNKDLKVHGWISSETETDPKNNTALGFWVIIPSNEFRSGGPLKQNLTSHVGPITLAMFHSAHYGGEDLVMKLQSNEPWKKVFGPIFVYLNTASDGQDQSWLWKDAKDQMTKEVQSWPYDFPDSEDFHKSDQRGSVYGKLQVLDRCISEDHILAEGAFVGLAPPGDTGSWQTECKGYQFWTQANEKGSFSINNILIGDYNLYAWVPGFIGEYRNNHVLTIKPGSKINVGDIVFEPPRNGPTLWEIGIPDRSAAEFYVPDPNPNYINKLYVNHPDKFRQYGLWERYAELYPNEDLIYKVGDSDYRKDWFFAHVTRKGDDGTYQGTTWQIKFKLHNMKRRGTYKLRVALAAAYASELQVRVNDPKQHSPLFTTGVIGKDNAIARHGIHGLYRLYNIDVPFHLLVKGDNTIYLTQTIATGPFEGIMYDYIRLEGPSTHY* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1125 656 Gene3D - 15 323 IPR014718 GO:0030246
Aev08g1125 656 SUPERFAMILY Starch-binding domain-like 353 451 IPR013784 GO:0030246
Aev08g1125 656 SUPERFAMILY Galactose-binding domain-like 458 650 IPR008979 -
Aev08g1125 656 Gene3D - 459 650 - -
Aev08g1125 656 Gene3D - 349 448 - -
Aev08g1125 656 SUPERFAMILY Galactose mutarotase-like 22 314 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aev08g1125 656 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 11 654 - -
Aev08g1125 656 CDD RGL4_M 352 451 IPR029413 -
Aev08g1125 656 Pfam Rhamnogalacturonate lyase family 12 213 IPR010325 -
Aev08g1125 656 CDD RGL4_N 18 315 - -
Aev08g1125 656 Pfam Polysaccharide lyase family 4, domain III 461 649 IPR029411 -
Aev08g1125 656 PANTHER LG27/30-LIKE GENE 11 654 - -
Aev08g1125 656 Pfam Polysaccharide lyase family 4, domain II 375 447 IPR029413 -
Aev08g1125 656 CDD RGL4_C 463 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1125 Aev-Chr8 6905287 6910223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1125 11 653 Polysaccharide Lyase AT1G09890 60.870 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1125 K18195 - gmx:100815677 1030.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1125 08 6905287 6910223 Aev08g1125 08 6905287 6910223 ECH