Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1120 ATGGCTCCAAGAAAGCGCAAGAATGAGGTGAAGCCTGAGAAGAAGGTGAAGGAAGAAGAGAAAGGTGGTTCTTCTTCCTCTAAACCCGGCAACACCATCGTCATTGAGCGAAGAGAAGAAAGCAAGGTGGAGGAGAAGAAAACAGAGGAACCCAAGAAGGAAGGAGAGAACAAAGAAGCAAAAGAAGAGGCCAAGAAACCGGAAAAAGTGGCGGGCGACGGAATTAGGGTTTCTTCTGGTGTTCGGAGTACGAAGGTGGCGCGTGAGGAATCGATGGCGGCGGTGAACCCACAGCCTCTTCAGGCGCGTCCGTTCGAGGAGGAGCACGCGATACCGCTCGACGAAGACGACCTCGTTGAGTACGAGGATGGCGGTGGTGATGGTATGGATGAGCAGGAAGAAGCTAATGTGAATCCGATTAGCGTGGGCGCGCGTGCGAATCACGCGGCGGCGGTAGTTATGCCTTCTCCGCGCACCAGTGAGCTCACTCTCTCTTTCGAGGGCGAGGTTTACGTCTTTCCTGCTGTCACACCTCAGAAGGTGCAAGCTGTTTTGCTGCTTTTGGGAGGACGTGATGTGCAGACCCCTGTGCCCACAGTTGAACTACCACTTGATCAGAGTAACAGGGGCATGGAAGAAACTCCGAAGCGTTCAAACCTCTCTCGGAGAATAGCCTCCTTGGTCAGGTTCCGTGAGAAACGTAAGGAACGGTGTTTTGACAAGAAAATTAGGTACACTGTGAGAAAAGAGGTGGCACAGAGGATGCATAGGAAGAATGGGCAGTTTGCATCCTTGAAGGAAAGCCCAGGCTCATCTAACTTCGATTCTGCTCAGAGTTCTAATCCAGATGGCACTCCTCATTCTGAAACTGTACGTAGATGTCAACACTGTGGTGTGAGTGAACATAATACACCTGCTATGCGTCGTGGGCCTGCTGGACCTAGGACTTTATGCAATGCGTGCGGCCTTATGTGGGCTAACAAGGGTACACTGAGAGATCTCAGCAAGGGAGGAAGAAACCTTTCTGTTGAACAAAGTGATCCGGAGACTCCTACTATTGATGTCAAGCCTACTATTCTGGAAGGGGAATTGCCTGGCATCCATGATGAGCAAGGTGTTTCTGAAGATCCTTCCAAAGCCATTGCTGCTGAAGGTTCTAATAATCATGGTATTAACCCTGGTGATGAGGAATTGCCTGAATCTGTGGAACACTTTACAGACGCTCTGCCAATGGGAATCGGTCATTCTTCAAATGATGATGAGCAGGAACCTCTGGTTGAGCTTTCTAATCCTTCAGATACAGATATTGACATTCCTGGAAACTTTGAATAG 1332 0.497 MAPRKRKNEVKPEKKVKEEEKGGSSSSKPGNTIVIERREESKVEEKKTEEPKKEGENKEAKEEAKKPEKVAGDGIRVSSGVRSTKVAREESMAAVNPQPLQARPFEEEHAIPLDEDDLVEYEDGGGDGMDEQEEANVNPISVGARANHAAAVVMPSPRTSELTLSFEGEVYVFPAVTPQKVQAVLLLLGGRDVQTPVPTVELPLDQSNRGMEETPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKESPGSSNFDSAQSSNPDGTPHSETVRRCQHCGVSEHNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSKGGRNLSVEQSDPETPTIDVKPTILEGELPGIHDEQGVSEDPSKAIAAEGSNNHGINPGDEELPESVEHFTDALPMGIGHSSNDDEQEPLVELSNPSDTDIDIPGNFE* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1120 443 MobiDBLite consensus disorder prediction 33 72 - -
Aev08g1120 443 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 287 338 - -
Aev08g1120 443 PANTHER GATA TRANSCRIPTION FACTOR 28 92 442 IPR045280 GO:0006355
Aev08g1120 443 ProSiteProfiles CCT domain profile. 223 265 IPR010402 GO:0005515
Aev08g1120 443 MobiDBLite consensus disorder prediction 256 291 - -
Aev08g1120 443 MobiDBLite consensus disorder prediction 1 101 - -
Aev08g1120 443 ProSiteProfiles GATA-type zinc finger domain profile. 288 347 IPR000679 GO:0006355|GO:0043565
Aev08g1120 443 SMART GATA_3 288 341 IPR000679 GO:0006355|GO:0043565
Aev08g1120 443 MobiDBLite consensus disorder prediction 367 443 - -
Aev08g1120 443 MobiDBLite consensus disorder prediction 1 24 - -
Aev08g1120 443 MobiDBLite consensus disorder prediction 264 288 - -
Aev08g1120 443 Pfam CCT motif 223 264 IPR010402 GO:0005515
Aev08g1120 443 Coils Coil 43 63 - -
Aev08g1120 443 ProSitePatterns GATA-type zinc finger domain. 294 321 IPR000679 GO:0006355|GO:0043565
Aev08g1120 443 SMART tify_2 155 190 IPR010399 -
Aev08g1120 443 Pfam tify domain 157 189 IPR010399 -
Aev08g1120 443 ProSiteProfiles Tify domain profile. 155 190 IPR010399 -
Aev08g1120 443 PANTHER GATA TRANSCRIPTION FACTOR 28-LIKE ISOFORM X1 92 442 - -
Aev08g1120 443 CDD ZnF_GATA 293 337 IPR000679 GO:0006355|GO:0043565
Aev08g1120 443 Pfam GATA zinc finger 294 330 IPR000679 GO:0006355|GO:0043565
Aev08g1120 443 Gene3D - 286 346 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1120 Aev-Chr8 6847891 6853997 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1120 120 336 Tify Gene Family AT1G51600 52.212 8.21e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev08g1120 CCT 1.8e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1120 - - gmx:100801328 544.658